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Ontology Concept Cooccurrence KG

tursynay edited this page Mar 30, 2021 · 2 revisions

Please fill out as specified below:

KP Tool Template

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XXX Provider Tool Description - (include a few sentences describing your tool, a high level explanation what is this tool used for, link to modes of access which will give the metadata about the resource, and a how-to guide for the tools.) See example below.

TIARA is KP created/supported/maintained by a XXX Provider. Click here to view the XXX Provider page. TIARA is a 3-tiered crown worn by the pope, a decorative jeweled or flowered headband or semicircle for formal wear by women.

  • Technical User Guide to TIARA - (instructions should allow a reasonably-competent user to make a test query using a specific example, retrieve the results, then create their own query, with tips and common errors described – similar to https://github.com/NCATSTranslator/Relay/wiki/ARS-Query-Process)
  • Modes of Access (provide a link) - Reasoner API v.#.#.#, SmartAPI registry, KGX - formatted Knowledge Graph
    • Link
    • Link
    • Link
  • Guide for user on how to open an issue and find current issues to avoid duplicate issues
  • How to build your own instance for NCATS Deployment pipeline

Use Cases- (Several use cases and detailed curl commands to retrieve the results using the most current Translator standards (eg: TRAPI, biolink, Architecture Principles) (with any that are NOT using these standards marked as such) Please store these use cases in the NCATS Translator Testing Repo and provide a link to the use cases in this wiki page.)

  • Link
  • Link

Knowledge Sources Accessed - (List the knowledge sources that your tools ingest). See example below.

  • BigGIM and BigCLAM
  • Columbia Open Health Data

Source Code - (include links to your source code). See example below

  • Jupyter notebook
  • Code file

External Documentation (List of urls for documentation sites). See example below.

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