Molecular Data Provider

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Description

A Molecular Data Provider (MolePro) translating molecular scale to systems scale through a Reasoner API.

Team Contact:

[email protected]

Interfaces

MolePro API

https://translator.broadinstitute.org/molecular_data_provider/api

Translator Reasoner API

https://translator.broadinstitute.org/molepro/trapi/v1.0/ui/

Knowledge Sources

• PubChem https://pubchem.ncbi.nlm.nih.gov/
• ChEMBL https://www.ebi.ac.uk/chembl/
• DrugBank https://www.drugbank.ca/
• ChemBank http://chembank.broadinstitute.org/
• ChEBI https://www.ebi.ac.uk/chebi
• Drug Repurposing Hub https://clue.io/repurposing
• DGIdb http://dgidb.org/
• GtoPdb https://www.guidetopharmacology.org/
• HMDB https://www.hmdb.ca/
• Inxight:Drugs https://drugs.ncats.io/
• STITCH http://stitch.embl.de
• RxNorm https://www.nlm.nih.gov/research/umls/rxnorm/index.html
• DrugCentral http://drugcentral.org/privacy
• CMAP https://clue.io/
• CTRP http://portals.broadinstitute.org/ctrp/
• DepMap https://depmap.org/portal/
• BigGIM http://biggim.ncats.io/api/
• MSigDB https://www.gsea-msigdb.org/gsea/msigdb/index.jsp
• STRING https://string-db.org/

For additional details about ingested data source see Catalog of MolePro knowledge sources (JSON formatted output).

Source Code

External Documentation

Additional MolePro documentation in GitGub