tools_kallisto.cwl

Documentation for kallisto.cwl

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Overview

Kallisto: Quant

Docker Requirement

mgibio/rnaseq:1.0.0

Inputs

Name	Label	Description	Type	Secondary Files
kallisto_index			File
fastqs			{'type': 'array', 'items': {'type': 'array', 'items': 'File'}}
strand			['null', {'type': 'enum', 'symbols': ['first', 'second', 'unstranded']}]

Outputs

Name	Label	Description	Type	Secondary Files
expression_transcript_table			File
expression_transcript_h5			File
fusion_evidence			File