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@genome

The McDonnell Genome Institute

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  1. gms gms Public archive

    The Genome Modeling System installer

    Perl 78 22

  2. bam-readcount bam-readcount Public

    Count bases in BAM/CRAM files

    CMake 309 96

  3. sciclone sciclone Public

    An R package for inferring the subclonal architecture of tumors

    R 117 55

  4. analysis-workflows analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    Common Workflow Language 102 57

  5. genome genome Public

    Core modules used by the GMS

    Perl 64 57

  6. bfx-workshop bfx-workshop Public

    A course on genomics and bioinformatics from WU

    HTML 60 19

Repositories

Showing 10 of 172 repositories
  • bfx-workshop Public

    A course on genomics and bioinformatics from WU

    genome/bfx-workshop’s past year of commit activity
    HTML 60 19 0 0 Updated Dec 11, 2024
  • qc-analysis-pipeline Public Forked from gatk-workflows/five-dollar-genome-analysis-pipeline

    Workflow used for WGS/WES data QC

    genome/qc-analysis-pipeline’s past year of commit activity
    WDL 8 BSD-3-Clause 44 9 0 Updated Oct 16, 2024
  • analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    genome/analysis-workflows’s past year of commit activity
    Common Workflow Language 102 MIT 57 74 15 Updated Jun 26, 2024
  • UR Public

    Rich Transactional Objects for Perl

    genome/UR’s past year of commit activity
    Perl 3 12 8 4 Updated Jun 15, 2024
  • snvstory Public Forked from nch-igm/snvstory

    Rapid and accurate ancestry inference using SNVs.

    genome/snvstory’s past year of commit activity
    Python 0 BSD-3-Clause 8 0 0 Updated May 8, 2024
  • cig-pipelines Public

    Workflows and resources for running pipelines for somatic mutation discovery in pangenomes plus miscellaneous tools..

    genome/cig-pipelines’s past year of commit activity
    WDL 0 1 0 0 Updated Apr 19, 2024
  • spectacle Public
    genome/spectacle’s past year of commit activity
    Ruby 0 2 9 9 Updated Mar 25, 2024
  • genome Public

    Core modules used by the GMS

    genome/genome’s past year of commit activity
    Perl 64 LGPL-3.0 57 9 0 Updated Mar 13, 2024
  • genome/cle-myeloseqhd’s past year of commit activity
    Python 2 4 3 0 Updated Dec 20, 2023
  • sciclone Public

    An R package for inferring the subclonal architecture of tumors

    genome/sciclone’s past year of commit activity
    R 117 55 4 1 Updated Oct 13, 2023

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