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tools_cellranger_mkfastq.cwl
APipe Tester edited this page Jul 14, 2021
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Run Cell Ranger mkfastq
registry.gsc.wustl.edu/alex.paul/cellranger:6.0.0
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| bcl_directory | Directory of the Illumina BCL run | Directory | ||
| simple_sample_csv | input simple sample CSV used to describe the way to demultiplex the flowcell | File |
| Name | Label | Description | Type | Secondary Files |
|---|---|---|---|---|
| samplesheet_csv | File | |||
| fastq_dir | Directory |