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ICG workshop 2023

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malvarofuss edited this page May 21, 2023 · 7 revisions

For the 2023 ICG/Acenet we are teaching several modules, that you can find links to below.

  1. Microbiome analysis using QIIME2 with 16S data
  2. Microbial diversity metrics and data visualization with QIIME2
  3. Metagenome sequence data analysis with Kraken2 and Phyloseq

Answers to questions

Contact

Useful Links

Main SOPs

Amplicon SOP v2 (qiime2-amplicon-2024.5)

PacBio Amplicon SOP v2 (qiime2-2022.2)

Metagenomics SOP v3

Wet-Lab SOPs on Protocols.io

Old SOPs

Tutorials

Microbiome for beginners

Metagenomics Resources

mSystems paper data

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