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206 Open 78 Closed
206 Open 78 Closed
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Issues list

Some confusion over Orphanet identifiers in EFO Priority: High
#403 opened Jan 22, 2025 by gaurav
Are we correctly determining the type for PubChem identifiers that don't have one?
#401 opened Jan 21, 2025 by gaurav
@gaurav
Improve the process of running Babel Priority: Medium
#400 opened Jan 21, 2025 by gaurav
Figure out whether to keep DuckDB or Parquet files so we don't need to generate both Priority: Medium
#399 opened Jan 21, 2025 by gaurav
NCBIGene sometimes has an unreported download issue Priority: High
#398 opened Jan 21, 2025 by gaurav
@gaurav
UMLS Phenotypes (that aren't phenotypes)
#394 opened Jan 8, 2025 by cbizon
Neutrophils
#393 opened Jan 8, 2025 by cbizon
1
UMLS/MESH for hydrogels: How to handle type mismatches?
#392 opened Jan 8, 2025 by cbizon
UMLS/EFO
#391 opened Jan 8, 2025 by cbizon
UMLS and roles
#390 opened Jan 7, 2025 by cbizon
1
GO/UMLS
#389 opened Jan 7, 2025 by cbizon
UMLS/NCBITaxon?
#388 opened Jan 7, 2025 by cbizon
UMLS/NCIT: Amino Acid sequence?
#387 opened Jan 7, 2025 by cbizon
1
Remove NCBITaxon:species etc.
#386 opened Jan 6, 2025 by gaurav Needs tests
1
Probably not-desirable conflation of citrate and lithium citrate when drug_chemical_conflate=true
#385 opened Jan 1, 2025 by colleenXu
UNII:DU32DM9CHD not cliqued with PUBCHEM.COMPOUND:156124857
#384 opened Dec 31, 2024 by gaurav Issues needing investigation
Identify and suppress stigmatizing language when choosing a preferred name
#383 opened Dec 31, 2024 by gaurav Issues needing investigation
Unexpected: Neomycin isn't the main name for its clique
#382 opened Dec 28, 2024 by colleenXu Issues needing investigation
1
Replace sequential PubMed load with a parallel process
#379 opened Dec 12, 2024 by gaurav
Add conflation information to the DuckDB databases
#378 opened Dec 10, 2024 by gaurav
Publish source code to Zenodo for long-term archiving
#376 opened Dec 4, 2024 by gaurav
Add support for overriding the default prefix order used to choose the preferred identifier
#375 opened Dec 2, 2024 by gaurav
1
Export SSSOM intermediate files with information on the type of provenance, not just the provenance itself
#374 opened Dec 2, 2024 by gaurav
Export explanations for cliques as an intermediate output directly from the intermediate files
#373 opened Dec 2, 2024 by gaurav
1
Add support for CURIE/URI normalization
#372 opened Dec 2, 2024 by gaurav
1
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