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BarakCohenLab

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  1. CRX-Active-Learning CRX-Active-Learning Public

    Deep learning model for the regulatory grammar of CRX-dependent enhancers and silencers and code to reproduce analyses related to the manuscript

    Jupyter Notebook 5

  2. CRX-Information-Content CRX-Information-Content Public

    Code for processing and analyzing massively parallel reporter assay data and computing information content of cis-regulatory sequences.

    Jupyter Notebook 4 1

  3. castools castools Public

    Command line tool for the CAS project

    Jupyter Notebook 3 1

  4. preimage preimage Public

    Active learning code for designing synthetic cis-regulatory sequences

    Python 1

  5. scMPRA scMPRA Public

    Python 1 2

  6. website website Public

    Repository for Cohen Lab website files

    HTML

Repositories

Showing 8 of 8 repositories
  • CRX-Active-Learning Public

    Deep learning model for the regulatory grammar of CRX-dependent enhancers and silencers and code to reproduce analyses related to the manuscript

    barakcohenlab/CRX-Active-Learning’s past year of commit activity
    Jupyter Notebook 5 BSD-3-Clause 0 0 0 Updated Dec 4, 2024
  • website Public

    Repository for Cohen Lab website files

    barakcohenlab/website’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 29, 2024
  • preimage Public

    Active learning code for designing synthetic cis-regulatory sequences

    barakcohenlab/preimage’s past year of commit activity
    Python 1 BSD-2-Clause 0 2 0 Updated Oct 17, 2024
  • crx-dms-manuscript Public

    Code for data analysis relevant to CRX DMS project

    barakcohenlab/crx-dms-manuscript’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Sep 2, 2024
  • scMPRA Public
    barakcohenlab/scMPRA’s past year of commit activity
    Python 1 BSD-3-Clause 2 0 0 Updated May 12, 2024
  • castools Public

    Command line tool for the CAS project

    barakcohenlab/castools’s past year of commit activity
    Jupyter Notebook 3 MIT 1 0 0 Updated Feb 4, 2024
  • retinopathy-manuscript Public

    Code for data analysis relevant to CRX retinopathy project

    barakcohenlab/retinopathy-manuscript’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Jan 17, 2024
  • CRX-Information-Content Public

    Code for processing and analyzing massively parallel reporter assay data and computing information content of cis-regulatory sequences.

    barakcohenlab/CRX-Information-Content’s past year of commit activity
    Jupyter Notebook 4 BSD-3-Clause 1 0 0 Updated Nov 24, 2021

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