This repository includes code for the analyses described in:

"Pathogenic variants in CRX have distinct cis-regulatory effects on enhancers and silencers in photoreceptors"

James L. Shepherdson¹﹐³*
Ryan Z. Friedman¹﹐³*
Yiqiao Zheng²
Chi Sun²
Inez Y. Oh²
David M. Granas¹﹐³
Barak A. Cohen¹﹐³
Shiming Chen²﹐⁴^
Michael A. White¹﹐³^

¹Department of Genetics,
²Department of Ophthalmology and Visual Sciences,
³Edison Family Center for Genome Sciences & Systems Biology,
⁴Department of Developmental Biology,
Washington University in St. Louis School of Medicine, St. Louis, MO 63110, USA

* Authors contributed equally
^ Corresponding Authors