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19 Open 8 Closed
19 Open 8 Closed
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Issues list

Can ALRA make imputation on CPM data?
#31 opened Oct 6, 2024 by Alvis-Jiang
In nrow(A_norm) * ncol(A_norm) : NAs produced by integer overflow
#30 opened Apr 30, 2024 by haoqing12
Large matrix errors (more than 2^31-1 non-zero entries) [on large datasets]
#29 opened Feb 28, 2024 by ghost
3
marker genes not specific for cluster after imputation
#27 opened Dec 5, 2023 by yamihn
help with alra
#26 opened Nov 30, 2023 by mocherry
1
Which selection.method to use for FindingVariableFeatures on ALRA imputed data
#25 opened Jul 13, 2023 by Rohit-Satyam
2
ALRAChooseKPlot throws error
#24 opened Jul 7, 2023 by Rohit-Satyam
1
Differential expression
#22 opened Aug 19, 2022 by DzenisKoca
5
Running ALRA with multiple samples
#21 opened Jul 29, 2022 by msraredon
11
Final proportion of non-zero values is large.
#20 opened Jul 26, 2022 by ayeTown
2
ALRA and Seurat
#17 opened May 20, 2022 by jsim91
1
Imputation before other QC steps?
#16 opened May 5, 2022 by ayeTown
GetAssayData(pbmc, slot = "counts") gives 0 x 0 matrix
#14 opened Feb 23, 2022 by Lumskie
1
Error in asMethod(object)
#13 opened Jan 20, 2022 by lf96abc
During FindVariableFeatures after ALRA output, count slot is empty?
#12 opened May 14, 2021 by lkqnaruto
Tips for larger matrices?
#11 opened Jan 12, 2021 by PedroMilanezAlmeida
3
Can I use ALRA imputed matrix to perform the Find Marker Gene step ?
#10 opened Dec 14, 2020 by gsx-ucas
2
big data set and K
#8 opened May 19, 2020 by yuGithuuub
2
Imputing integrated data
#5 opened Aug 2, 2019 by kvshams
1
ProTip! What’s not been updated in a month: updated:<2024-11-03.