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Can I use ALRA imputed matrix to perform the Find Marker Gene step ? #10

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gsx-ucas opened this issue Dec 14, 2020 · 2 comments
Open

Can I use ALRA imputed matrix to perform the Find Marker Gene step ? #10

gsx-ucas opened this issue Dec 14, 2020 · 2 comments

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@gsx-ucas
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Hello, as the title say, can I use the imputed matrix to find marker genes and differentially expressed genes for downstream analysis ?
@JunZhao1990
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JunZhao1990 commented Jan 12, 2021 •
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Thanks for your interest in ALRA!
Yes, you can run "Find Marker Gene" step after ALRA in the downstream analysis.

@yamihn
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yamihn commented Dec 6, 2023

@JunZhao1990 when we set alra assay to find markers Is very hard to distinguish Cell populations

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@JunZhao1990 @gsx-ucas @yamihn