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Kluger Lab

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  1. FIt-SNE FIt-SNE Public

    Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    C++ 592 106

  2. SpectralNet SpectralNet Public

    Deep network that performs spectral clustering

    Python 322 102

  3. ALRA ALRA Public

    Imputation method for scRNA-seq based on low-rank approximation

    R 74 19

  4. GeneTrajectory GeneTrajectory Public

    R implementation of GeneTrajectory

    R 56 10

  5. t-SNE-Heatmaps t-SNE-Heatmaps Public

    Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq

    R 48 11

  6. pyFIt-SNE pyFIt-SNE Public

    Python Wrapper for FIt-SNE

    C++ 45 11

Repositories

Showing 10 of 32 repositories
  • bipca Public

    Biwhitened PCA

    Jupyter Notebook 7 0 0 1 Updated Feb 19, 2025
  • DysonEqualizer Public
    Python 0 MIT 0 0 0 Updated Feb 5, 2025
  • bipca-experiment Public
    Python 0 0 0 0 Updated Feb 2, 2025
  • SIMVI Public
    Jupyter Notebook 5 BSD-3-Clause 0 0 0 Updated Jan 1, 2025
  • LocalizedMarkerDetector Public
    R 0 0 0 0 Updated Oct 16, 2024
  • GeneTrajectory-python Public

    Python implementation of Gene Trajectory

    Jupyter Notebook 25 MIT 2 2 0 Updated Sep 4, 2024
  • GeneTrajectory Public

    R implementation of GeneTrajectory

    R 56 10 12 0 Updated Apr 5, 2024
  • GeneTrajectory-paper Public
    0 0 0 0 Updated Apr 5, 2024
  • ALRA Public

    Imputation method for scRNA-seq based on low-rank approximation

    R 74 MIT 19 19 1 Updated Dec 14, 2023
  • SpectralNet Public

    Deep network that performs spectral clustering

    Python 322 MIT 102 14 0 Updated Feb 23, 2023
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