Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

continuous integration #2

Merged
merged 62 commits into from
Apr 4, 2022
Merged

continuous integration #2

merged 62 commits into from
Apr 4, 2022

Conversation

aaronspring
Copy link
Collaborator

@aaronspring aaronspring commented Mar 31, 2022

  • implements CI
  • post-install script install_julia_packages called by pip install/develop
  • strip down requirements on python and julia packages

@aaronspring aaronspring self-assigned this Mar 31, 2022
@aaronspring aaronspring added the infrastructure what's needed to sustain the package label Mar 31, 2022
@aaronspring
Copy link
Collaborator Author

I get the same error locally:

_____________________________________________ ERROR collecting tests/test_bitinformation_pipeline.py _____________________________________________
tests/test_bitinformation_pipeline.py:7: in <module>
    from bitinformation_pipeline import bitinformation_pipeline
bitinformation_pipeline/bitinformation_pipeline.py:3: in <module>
    jl = Julia(compiled_modules=False)
/work/mh0727/m300524/conda-envs/bitinfo/lib/python3.10/site-packages/julia/core.py:513: in __init__
    self._call("const PyCall = Base.require({0})".format(PYCALL_PKGID))
/work/mh0727/m300524/conda-envs/bitinfo/lib/python3.10/site-packages/julia/core.py:549: in _call
    self.check_exception(src)
/work/mh0727/m300524/conda-envs/bitinfo/lib/python3.10/site-packages/julia/core.py:603: in check_exception
    raise JuliaError(u'Exception \'{}\' occurred while calling julia code:\n{}'
E   julia.core.JuliaError: Exception 'ArgumentError' occurred while calling julia code:
E   const PyCall = Base.require(Base.PkgId(Base.UUID("438e738f-606a-5dbb-bf0a-cddfbfd45ab0"), "PyCall"))

@aaronspring
Copy link
Collaborator Author

similar JuliaPy/pyjulia#432

@aaronspring
Copy link
Collaborator Author

use python 3.8 JuliaPy/pyjulia#444

@aaronspring
Copy link
Collaborator Author

@observingClouds Can be review and later squash merged

Copy link
Owner

@observingClouds observingClouds left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

This looks good to me! So much hard work!

environment.yml Outdated Show resolved Hide resolved
@aaronspring aaronspring merged commit eec6c5c into master Apr 4, 2022
@aaronspring aaronspring deleted the ci branch April 4, 2022 21:22
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
infrastructure what's needed to sustain the package
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants