parse: Prefer strain
over name
as sequence ID field
#2838
ci.yaml
on: pull_request
Matrix: pytest-cram
mypy
46s
pyright
14s
build-docs
/
build-conda
0s
build-docs
/
build-pip
2m 8s
check-docs
34s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
0s
Annotations
15 errors and 3 warnings
test (python=3.8 biopython=1.80)
Process completed with exit code 1.
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test (python=3.9 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.9 biopython=latest)
The operation was canceled.
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test (python=3.9 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.9 biopython=1.80)
The operation was canceled.
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test (python=3.11 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.11 biopython=latest)
The operation was canceled.
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test (python=3.10 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.10 biopython=1.80)
The operation was canceled.
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test (python=3.10 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.10 biopython=latest)
The operation was canceled.
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test (python=3.11 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.11 biopython=1.80)
The operation was canceled.
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test (python=3.8 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
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test (python=3.8 biopython=latest)
The operation was canceled.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
Name | Size | |
---|---|---|
output-avian-flu
|
93.4 KB |
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output-dengue
|
1.32 MB |
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output-ebola
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111 KB |
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output-lassa
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322 KB |
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output-measles
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3.85 MB |
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output-mpox
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12.7 MB |
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output-mumps
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339 KB |
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output-ncov
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506 KB |
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output-rsv
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9.42 MB |
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output-seasonal-cov
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1.46 MB |
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output-seasonal-flu
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49.2 KB |
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output-tb
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5.03 MB |
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output-zika
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741 KB |
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