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Add "Host Genus" and "Host Type" coloring to the phylogenetic tree #42

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merged 8 commits into from
Nov 18, 2024

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@j23414 j23414 commented Nov 13, 2024

Description of proposed changes

Add "Host Genus" and "Host Type" coloring to the phylogenetic tree as described by #39 (comment)

Staged view of "Host Type": https://next.nextstrain.org/staging/WNV/host?c=host_type

Related issue(s)

Checklist

  • Double check the host_type="Other" annotations, several seem to be "Bird"
  • Checks pass

@j23414 j23414 linked an issue Nov 13, 2024 that may be closed by this pull request
@j23414 j23414 changed the title Apply a mapping function to the "host" field to derive "host_genus" and "host_type" fields Add "Host Genus" and "Host Type" coloring to the phylogenetic tree Nov 13, 2024
@j23414 j23414 force-pushed the map-host-genus-and-host-type branch from 7973167 to 1463821 Compare November 13, 2024 22:25
@j23414 j23414 marked this pull request as ready for review November 16, 2024 10:16
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j23414 commented Nov 17, 2024

Thanks @DOH-LMT2303, updated the site based on your new annotations at:

and it's ready for review

@j23414 j23414 requested a review from DOH-LMT2303 November 17, 2024 16:42
@j23414 j23414 merged commit 68d122c into main Nov 18, 2024
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@j23414 j23414 deleted the map-host-genus-and-host-type branch November 18, 2024 18:10
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Map host genus and host type
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