Add host genus and type coloring to trees

nextstrain · Nov 13, 2024 · 7973167 · 7973167
1 parent d66ffed
commit 7973167
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Showing 2 changed files with 11 additions and 3 deletions.
diff --git a/phylogenetic/defaults/auspice_config.json b/phylogenetic/defaults/auspice_config.json
@@ -10,7 +10,9 @@
     {"key": "lineage", "title": "Strain", "type": "categorical"},
     {"key": "clade_membership", "title": "Clade", "type": "categorical"},
     {"key": "author", "title": "Authors", "type": "categorical"},
-    {"key": "host", "title": "Host Species", "type": "categorical"}
+    {"key": "host", "title": "Host Species", "type": "categorical"},
+    {"key": "host_genus", "title": "Host Genus", "type": "categorical"},
+    {"key": "host_type", "title": "Host Type", "type": "categorical"}
   ],
   "geo_resolutions": [
     "state",
@@ -29,6 +31,8 @@
     "author",
     "clade_membership",
     "host",
+    "host_genus",
+    "host_type",
     "lineage"
   ],
   "display_defaults": {

diff --git a/phylogenetic/defaults/auspice_config_global.json b/phylogenetic/defaults/auspice_config_global.json
@@ -6,7 +6,9 @@
     {"key": "region", "title": "Region", "type": "categorical"},
     {"key": "country", "title": "Country", "type": "categorical"},
     {"key": "author", "title": "Authors", "type": "categorical"},
-    {"key": "host", "title": "Host Species", "type": "categorical"}
+    {"key": "host", "title": "Host Species", "type": "categorical"},
+    {"key": "host_genus", "title": "Host Genus", "type": "categorical"},
+    {"key": "host_type", "title": "Host Type", "type": "categorical"}
   ],
   "geo_resolutions": [
     "region",
@@ -21,7 +23,9 @@
     "region",
     "country",
     "author",
-    "host"
+    "host",
+    "host_genus",
+    "host_type"
   ],
   "display_defaults": {
     "color_by": "region",