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Update deploy.yml
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adRn-s authored Sep 16, 2024
1 parent 2446bf1 commit b9e9c46
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/deploy.yml
Original file line number Diff line number Diff line change
Expand Up @@ -30,12 +30,12 @@ jobs:
with:
environment-name: Rseurat
environment-file: configs/conda.yml
cache-env: true
#cache-env: true
- name: MicromambaActivateEnv
run: micromamba activate Rseurat
- name: RemoteInstallGH
run: |
apt update && apt install -y libicu-dev libicu66
apt update && apt install -y libicu-dev libicu58
Rscript -e "remotes::install_github('satijalab/seurat-data')"
Rscript -e "SeuratData::InstallData('ifnb')" # if this fails, download file.tar.gz w/ cURL, then install.packages('file.tar.gz', repos=NULL, type='source')
Rscript -e "SeuratData::InstallData('pbmc3k')"
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