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--rerun-incomplete flag not working #147

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matthewabirk opened this issue May 10, 2019 · 1 comment
Open

--rerun-incomplete flag not working #147

matthewabirk opened this issue May 10, 2019 · 1 comment

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@matthewabirk
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I had to kill 9 elvers because I ran out of disk space. Now when I try to rerun, it suggests including the --rerun-incomplete flag. But when I add this, it complains that it does not recognize it.

@bluegenes
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--rerun-incomplete is a snakemake flag, and is not integrated into elvers. The python api equivalent seems to be force_incomplete. I've added this to #148, and it will be integrated into the main codebase with that branch.

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