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1. sourmash-bio/sourmash_plugin_branchwater sourmash-bio/sourmash_plugin_branchwater Public

   fast, multithreaded sourmash operations: search, compare, and gather.

   Python 16 3

2. sourmash-bio/sourmash sourmash-bio/sourmash Public

   Quickly search, compare, and analyze genomic and metagenomic data sets.

   Python 475 80

3. dib-lab/genome-grist dib-lab/genome-grist Public

   map Illumina metagenomes to genomes!

   Jupyter Notebook 36 6

4. dib-lab/charcoal dib-lab/charcoal Public

   Remove contaminated contigs from genomes using k-mers and taxonomies.

   Python 52 1

5. dib-lab/2020-workflows-paper dib-lab/2020-workflows-paper Public

   Strategies for leveraging workflow systems to streamline large-scale biological analyses

   HTML 6 8

6. sourmash-bio/sourmash_plugin_directsketch sourmash-bio/sourmash_plugin_directsketch Public

   Rust 1 1