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Lk add exome testing #1461

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Lk add exome testing #1461

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ekiernan
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@ekiernan ekiernan commented Jan 3, 2025

testing PR

nikellepetrillo and others added 19 commits January 2, 2025 09:26
@nikellepetrillo
make both tests the same
b6152e0
@nikellepetrillo
make both tests the same
ff623f4
@nikellepetrillo
add testsnm3c to dockstore yml
4f05889
@nikellepetrillo
port snm3c
853ca7a
@nikellepetrillo
port snm3c
391a161
@nikellepetrillo
debugging fetch_dockstore_commit.py
53fa6a2
@nikellepetrillo
debugging fetch_dockstore_commit.py
9afb448
@nikellepetrillo
debugging fetch_dockstore_commit.py
508f84d
@nikellepetrillo
debugging fetch_dockstore_commit.py
86a3a76
@nikellepetrillo
remove nested inputs
02475a6
@nikellepetrillo
remove nested inputs
d37ade7
@ekiernan
Lk atac test porting (#1457)
cce354d 
Added changes for paired-tag tests
@nikellepetrillo
try to add testmultiome
ebae52a
@nikellepetrillo
Merge remote-tracking branch 'origin/np_jw_test_illumina_genotyping_a…
efd99f2 
…rrays' into np_jw_test_illumina_genotyping_arrays
@nikellepetrillo
Merge branch 'develop' into np_jw_test_illumina_genotyping_arrays
1f69e8b
@nikellepetrillo
add http imports to TestMultiome.wdl and Multiome.wdl
d37b6da
@nikellepetrillo
add TestReblockGVCF.wdl to the new testing framework
e08b2c4
@ekiernan
adding dockstore yml and gha yml for exome testing
4e78450
@ekiernan
update ExomeTestWDL
92c98e6
@github-actions GitHub Actions
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github-actions bot commented Jan 3, 2025

Remember to squash merge!

@github-actions GitHub Actions
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github-actions bot commented Jan 3, 2025

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions GitHub Actions
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github-actions bot commented Jan 3, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions GitHub Actions
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github-actions bot commented Jan 3, 2025

Remember to squash merge!

@github-actions GitHub Actions
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github-actions bot commented Jan 3, 2025

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions GitHub Actions
Copy link

github-actions bot commented Jan 3, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions GitHub Actions
Copy link

github-actions bot commented Jan 3, 2025

Remember to squash merge!

@github-actions GitHub Actions
Copy link

github-actions bot commented Jan 3, 2025

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
Multiome.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions GitHub Actions
Copy link

github-actions bot commented Jan 3, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

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2 participants
@ekiernan @nikellepetrillo