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docker image ModuleNotFoundError

Status: Open.

#192 In bcbio/bcbio-nextgen-vm;

· ltnetcase opened on Oct 28, 2020

minimap2 support

Status: Open.

#191 In bcbio/bcbio-nextgen-vm;

· fgvieira opened on Jul 30, 2020

Delete txtmp directory automatically after successful genome installation

enhancement

Status: Open.

#190 In bcbio/bcbio-nextgen-vm;

· hackdna opened on Jul 17, 2020

Error while downloading docker image and tools - non-zero exit status 1

Status: Open.

#189 In bcbio/bcbio-nextgen-vm;

· sarthi2395 opened on May 27, 2020

test_cwl_arvados_workflow fails due to HttpError

bug

Status: Open.

#187 In bcbio/bcbio-nextgen-vm;

· hackdna opened on May 20, 2020

test_cwl_docker_joint_calling_workflow fails due to TypeError

bug

Status: Open.

#186 In bcbio/bcbio-nextgen-vm;

· hackdna opened on May 20, 2020

test_docker_ipython does not run to completion

bug

Status: Open.

#185 In bcbio/bcbio-nextgen-vm;

· hackdna opened on May 20, 2020

Kraken not availble inside the docker image

Status: Open.

#179 In bcbio/bcbio-nextgen-vm;

· cvaske opened on Jan 7, 2020

Version return is missing

Status: Open.

#178 In bcbio/bcbio-nextgen-vm;

· mjsteinbaugh opened on Oct 2, 2019

Quay registry deprecation notice on clean install

Status: Open.

#177 In bcbio/bcbio-nextgen-vm;

· mjsteinbaugh opened on Oct 2, 2019

remote data on S3

Status: Open.

#172 In bcbio/bcbio-nextgen-vm;

· matthdsm opened on Jan 29, 2019

gatk-framework: command not found

Status: Open.

#171 In bcbio/bcbio-nextgen-vm;

· romanzac opened on Oct 30, 2018