Skip to content

Actions: TimD1/vcfdist

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
63 workflow runs
63 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

fix: added integration test data Tests #29: Commit 54d6b77 pushed by TimD1
January 15, 2025 02:43 2m 21s dev
dev
January 15, 2025 02:43 2m 21s
fix: added --git-aware to pytest Tests #28: Commit dc198cc pushed by TimD1
January 15, 2025 02:34 2m 22s dev
dev
January 15, 2025 02:34 2m 22s
fix: install pytest and pytest-workflow in CI Tests #27: Commit d7d5731 pushed by TimD1
January 15, 2025 02:02 2m 45s dev
dev
January 15, 2025 02:02 2m 45s
feat: added pytest to CI Tests #26: Commit d640a5d pushed by TimD1
January 15, 2025 01:57 1m 46s dev
dev
January 15, 2025 01:57 1m 46s
fix: off-by-one error in merging clusters Tests #25: Commit 71a0156 pushed by TimD1
December 23, 2024 20:45 1m 53s dev
dev
December 23, 2024 20:45 1m 53s
feat: print each variant subset Tests #24: Commit 3e2f251 pushed by TimD1
December 23, 2024 02:27 1m 49s dev
dev
December 23, 2024 02:27 1m 49s
fix: several bug fixes related to superclusters and start/end Tests #23: Commit 80b68be pushed by TimD1
December 23, 2024 00:00 2m 1s dev
dev
December 23, 2024 00:00 2m 1s
fix(ci): apt install liblzma Tests #22: Commit 880d897 pushed by TimD1
December 21, 2024 18:00 1m 57s dev
dev
December 21, 2024 18:00 1m 57s
fix(ci): apt install lib-bz2 Tests #21: Commit ef66479 pushed by TimD1
December 21, 2024 17:59 21s dev
dev
December 21, 2024 17:59 21s
fix(ci): github runner to ubuntu-24.04 Tests #20: Commit 0d46c53 pushed by TimD1
December 21, 2024 17:57 13s dev
dev
December 21, 2024 17:57 13s
feat: updated main pipeline printing/timers Tests #19: Commit 6ae84b1 pushed by TimD1
December 21, 2024 17:15 13s dev
dev
December 21, 2024 17:15 13s
feat: merge failed small vars with unevaluated large vars Tests #18: Commit c4d7139 pushed by TimD1
December 21, 2024 16:37 16s dev
dev
December 21, 2024 16:37 16s
feat: removed all usage of vars->clusters[] Tests #17: Commit f752863 pushed by TimD1
December 20, 2024 22:42 14s dev
dev
December 20, 2024 22:42 14s
fix: loop bug in query graph Tests #16: Commit aed0a1c pushed by TimD1
December 4, 2024 01:53 1m 46s dev
dev
December 4, 2024 01:53 1m 46s
feat: genotype errors now written for each variant type Tests #15: Commit 1aa755d pushed by TimD1
November 30, 2024 18:12 2m 37s dev
dev
November 30, 2024 18:12 2m 37s
fix: ref/alt bugfix, added some debug printing Tests #14: Commit eaa2107 pushed by TimD1
November 30, 2024 16:59 1m 46s dev
dev
November 30, 2024 16:59 1m 46s
feat: superclusters with FNs are re-evaluated Tests #13: Commit 637ed7c pushed by TimD1
November 29, 2024 04:48 1m 40s dev
dev
November 29, 2024 04:48 1m 40s
feat: allele count errors are now printed Tests #12: Commit 991c247 pushed by TimD1
November 29, 2024 03:05 1m 43s dev
dev
November 29, 2024 03:05 1m 43s
fix: fix GT fixing tie for FP variants Tests #11: Commit 4c05b31 pushed by TimD1
November 21, 2024 04:43 1m 52s dev
dev
November 21, 2024 04:43 1m 52s
fix: disallow non-ref sync points unless both submatrices change Tests #10: Commit eca0b12 pushed by TimD1
November 19, 2024 02:13 1m 45s dev
dev
November 19, 2024 02:13 1m 45s
fix: ref_dist calculated using wf_ed, not variants. Tests #9: Commit a69d0bd pushed by TimD1
November 18, 2024 03:17 2m 21s dev
dev
November 18, 2024 03:17 2m 21s
wip: fixing sync points, genotype errors, phase sets Tests #8: Commit 237d0e7 pushed by TimD1
November 16, 2024 20:38 1m 40s dev
dev
November 16, 2024 20:38 1m 40s
feat: track genotype errors, print to summary.vcf Tests #7: Commit dd67202 pushed by TimD1
November 16, 2024 15:41 1m 47s dev
dev
November 16, 2024 15:41 1m 47s
feat: print switch/flip error rates to summary TSV Tests #6: Commit a1a2852 pushed by TimD1
November 11, 2024 02:37 2m 7s dev
dev
November 11, 2024 02:37 2m 7s
feat: added bioconda downloads badge Tests #5: Commit 3c0d8bf pushed by TimD1
November 2, 2024 14:04 1m 38s dev
dev
November 2, 2024 14:04 1m 38s