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@SciLifeLab

Science For Life Laboratory

Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research

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  1. genologics Public

    Forked from pekrau/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    Python 29 43

  2. NouGAT Public

    Forked from vezzi/NouGAT

    NouGAT is a pipeline that automates de novo assembly project tasks, generating a first draft assembly.

    Python 5 6

  3. TIDDIT Public

    TIDDIT - structural variant calling

    Cython 74 15

  4. courses Public

    Forked from henrythemes/jekyll-bootstrap-theme

    Course homepages for some of the courses given at SciLifeLab

    HTML 21 34

Repositories

Showing 10 of 46 repositories
  • TIDDIT Public

    TIDDIT - structural variant calling

    Cython 74 15 6 0 Updated Mar 13, 2025
  • umi-transfer Public

    A Rust software to extract Unique Molecular Identifiers in FastQ files and embedd them into the ID of the corresponding reads.

    Rust 5 MIT 2 1 1 Updated Nov 9, 2024
  • genologics Public Forked from pekrau/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    Python 29 MIT 53 9 0 Updated Aug 26, 2024
  • facs Public

    Fast and Accurate Classification of Sequences using Bloom filters

    Jupyter Notebook 16 9 8 0 Updated Apr 19, 2023
  • OrderPortal Public Forked from ScilifelabDataCentre/OrderPortal

    A portal for orders (a.k.a. requests, project applications) to a SciLifeLab facility from its users.

    Python 1 MIT 13 0 0 Updated Oct 18, 2022
  • standalone_scripts-1 Public archive Forked from NationalGenomicsInfrastructure/standalone_scripts

    Repository to store standalone scripts that do not belong to any bigger package or repository

    Python 0 MIT 22 0 0 Updated Jun 20, 2022
  • percolator Public Forked from percolator/percolator

    Semi-supervised learning for peptide identification from shotgun proteomics datasets

    C++ 0 39 0 0 Updated Jan 5, 2021
  • coronastatus Public Forked from BustByte/coronastatus

    Open source webapp that let people report their health status to get overview of COVID-19 🇳🇴🇳🇱🇸🇰🇲🇽🇮🇹🇮🇳🇵🇭🇸🇪🇩🇰🇹🇷🇧🇪

    HTML 0 MIT 91 1 0 Updated Mar 28, 2020
  • scilifelab Public archive Forked from b97pla/scilifelab

    Misc code snippets for Science For Life Laboratory

    Python 5 MIT 25 10 0 Updated Jan 30, 2020
  • Sarek Public archive Forked from nf-core/sarek

    Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

    Nextflow 133 MIT 436 0 0 Updated Jan 27, 2020
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