update for coo, open ms_co_occur_integrate to be used.

STOmics · Nov 1, 2023 · 7e1c896 · 7e1c896
1 parent 53b1fbc
commit 7e1c896
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/stereo/algorithm/co_occurrence.py b/stereo/algorithm/co_occurrence.py
@@ -285,7 +285,8 @@ def co_occurrence(
             ret[ret_key] = pd.DataFrame(tmp, index=group_codes).T
         return ret
 
-    def ms_co_occur_integrate(self, ms_data, scope, use_col, res_key='co_occurrence'):
+    @staticmethod
+    def ms_co_occur_integrate(ms_data, scope, use_col, res_key='co_occurrence'):
         from collections import Counter
         if use_col not in ms_data.obs:
             tmp_list = []