RTXteam · saramsey · Oct 9, 2025 · Oct 9, 2025 · Dec 18, 2025 · Dec 18, 2025
diff --git a/code/UI/autocomplete/GenerateQuestionTerms.py b/code/UI/autocomplete/GenerateQuestionTerms.py
diff --git a/code/reasoningtool/sharedtrunk.py → code/archive/sharedtrunk.py b/code/reasoningtool/sharedtrunk.py → code/archive/sharedtrunk.py
diff --git a/code/reasoningtool/CmdPubMedNGD.py b/code/reasoningtool/CmdPubMedNGD.py
diff --git a/code/reasoningtool/MLDrugRepurposing/MyChemGT.py b/code/reasoningtool/MLDrugRepurposing/MyChemGT.py
diff --git a/code/reasoningtool/MLDrugRepurposing/README.md b/code/reasoningtool/MLDrugRepurposing/README.md
@@ -1,10 +1,15 @@
 # NOTE: dependencies have been removed
 
-As of May 15, 2025, one of the modules on which the code in this directory
+On May 15, 2025, one of the modules on which some code in this directory
 depends, `RTX/code/reasoningtool/SemMedDB`, was deleted from the `RTXteam/RTX`
 project area (see #2454). But if you need this code, you can obtain it from any
-RTXteam/RTX [release](https://github.com/RTXteam/RTX/releases) (the code in the
-SemMedDB project directory hasn't changed since 2019).
+earlier RTXteam/RTX [release](https://github.com/RTXteam/RTX/releases).
+
+On Oct. 9, 2025, a module,
+`RTX/code/reasoningtool/kg-construction/SynonymMapper.py`, on which the
+`MyChemGT.py` module in this directory depends, was deleted from the
+`RTXteam/RTX` project area (see #2582). But if you need this code, you can
+obtain it from any earlier RTXteam/RTX [release](https://github.com/RTXteam/RTX/releases).
 
 # Make sure python is set up correctly
 

diff --git a/code/reasoningtool/Neo4jToNetworkX.py b/code/reasoningtool/Neo4jToNetworkX.py