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NEXUS Personalized Health Technologies

ETH Technology Platform for Personalized Health

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  1. scAmpi_single_cell_RNA scAmpi_single_cell_RNA Public

    Code related to scRNA analysis using the scAmpi workflow

    R 25 9

  2. TMARKER TMARKER Public archive

    TMARKER is a software for cancer cell nucleus detection, segmentation, counting, and classification.

    HTML 14 7

  3. lab_data_management lab_data_management Public

    Lab data management

    HTML 3

  4. gExcite_pipeline gExcite_pipeline Public

    single-cell Gene and AnTibody Expression pipeline

    R 2 1

  5. container_workflow container_workflow Public

    Building Containerized Workflows using different workflow engines

    Python 2

  6. smnrp smnrp Public

    Secure Multifunctional Nginx Reverse Proxy

    HTML 2 2

Repositories

Showing 10 of 46 repositories
  • ena_upload_ms Public
    Python 2 MIT 0 1 0 Updated Apr 24, 2025
  • nexus-app-stack-contrib Public
    Python 1 Apache-2.0 0 1 1 Updated Apr 24, 2025
  • lab_data_management Public

    Lab data management

    HTML 3 MIT 0 14 8 Updated Apr 15, 2025
  • smnrp Public

    Secure Multifunctional Nginx Reverse Proxy

    HTML 2 2 2 1 Updated Mar 28, 2025
  • nexus-data-management-tools Public

    Contains tools used for dataman

    Python 0 0 0 0 Updated Mar 25, 2025
  • nexus-se-docs Public

    The central docs repository for all things related to software engineering and internal SE tools

    Shell 1 MIT 0 0 0 Updated Feb 12, 2025
  • scROSHI Public
    R 1 4 3 1 Updated Dec 12, 2024
  • snakemake-report-plugin-custom Public

    A custom report plugin for snakemake workflows

    Python 0 0 0 0 Updated Nov 12, 2024
  • scAmpi_single_cell_RNA Public

    Code related to scRNA analysis using the scAmpi workflow

    R 25 GPL-3.0 9 1 2 Updated Nov 7, 2024
  • gExcite_pipeline Public

    single-cell Gene and AnTibody Expression pipeline

    R 2 GPL-3.0 1 0 1 Updated Oct 29, 2024
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