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@BrainCOGS

BRAIN CoGS

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  1. HPC_manifolds HPC_manifolds Public

    Analysis of hippocampal activity in the towers task

    MATLAB 19 5

  2. Microscope Microscope Public

    Design and documentation for the 2p microscope.

    PostScript 13 1

  3. brain_atlas_toolkit brain_atlas_toolkit Public

    A set of python tools for navigating, viewing and manipulating hierarchical brain atlases

    Python 5

  4. precomputed precomputed Public

    Slurm/python scripts for converting light sheet data to precomputed format for Neuroglancer visualization

    Python 3 1

  5. BrainPipe BrainPipe Public

    Forked from PrincetonUniversity/BrainPipe

    Jupyter Notebook 3 1

  6. laserGalvoControl laserGalvoControl Public

    Matlab-based software to control scanning-laser setups for optogenetic experiments. Written by Lucas Pinto, lpinto@princeton.edu

    MATLAB 2 2

Repositories

Showing 10 of 37 repositories
  • U19-pipeline-matlab Public

    Data pipeline for U19 projects

    MATLAB 0 10 6 0 Updated Mar 28, 2025
  • U19-pipeline-python Public

    The python data pipeline defined with DataJoint for U19 projects

    Jupyter Notebook 1 14 2 2 Updated Mar 26, 2025
  • streamlit-drawable-canvas Public Forked from andfanilo/streamlit-drawable-canvas

    Do you like Quick, Draw? Well what if you could train/predict doodles drawn inside Streamlit? Also draws lines, circles and boxes over background images for annotation.

    TypeScript 0 MIT 101 0 0 Updated Mar 19, 2025
  • JavaScript 0 1 0 1 Updated Mar 10, 2025
  • Microscope Public

    Design and documentation for the 2p microscope.

    PostScript 13 CC-BY-4.0 1 0 0 Updated Feb 20, 2025
  • HTML 0 0 0 0 Updated Feb 7, 2025
  • element-calcium-imaging Public Forked from datajoint/element-calcium-imaging

    DataJoint Element for multi-photon calcium imaging analysis with CaImAn and Suite2p

    Jupyter Notebook 0 MIT 47 0 0 Updated Jan 24, 2025
  • Python 0 4 0 0 Updated Jan 14, 2025
  • RecordingProcessJobGUI Public

    GUI to register recordings in the automatic pipeline

    Python 0 GPL-3.0 2 0 1 Updated Dec 10, 2024
  • BrainCogsEphysSorters Public

    Compilation of electrophysiology sorters supported in the U19 Ephys Pipeline

    MATLAB 0 GPL-3.0 2 0 0 Updated Oct 10, 2024