143 Branches 91 Tags

Name	Name	Last commit message	Last commit date
Latest commit morriscb Merge branch 'rc/2.16.2' Nov 30, 2023 a9b5c68 · Nov 30, 2023 History 6,882 Commits
.bamboo	.bamboo	revert duplicate verbosity	Sep 26, 2019
.github	.github	Change github runner location	Nov 10, 2023
allensdk	allensdk	Add scaling factor to fix mean_waveforms and CSD.	Nov 30, 2023
doc_template	doc_template	Update notebooks	Nov 30, 2023
docker	docker	Update anaconda3 docker file.	Jul 31, 2023
scripts/brain_observatory	scripts/brain_observatory	Fix doc	Dec 23, 2022
test-reports	test-reports	Build trigger test	Jan 31, 2017
.flake8	.flake8	Fix linting on failing files updated in previous commit.	Aug 21, 2023
.gitignore	.gitignore	dont track /venv	Nov 26, 2019
.readthedocs.yml	.readthedocs.yml	Update read the docs build file	Nov 10, 2023
CHANGELOG.md	CHANGELOG.md	Update changelog and index.rst	Nov 30, 2023
CODEOWNERS	CODEOWNERS	Pre Release Chanegs	Apr 29, 2020
CONTRIBUTING.md	CONTRIBUTING.md	GH #1542 - Fix broken links in contribution guidelines	May 3, 2020
LICENSE.txt	LICENSE.txt	ABS-132; license update	Aug 11, 2017
MANIFEST.in	MANIFEST.in	#1007 #1071 #1050 patch incorrect structure assignments	Oct 8, 2019
Makefile	Makefile	use xdist for faster testing	Oct 10, 2019
README.md	README.md	removes circleci badge	Mar 4, 2021
RELEASE_INSTRUCTIONS.md	RELEASE_INSTRUCTIONS.md	Update RELEASE_INSTRUCTIONS.md	Sep 30, 2019
codecov.yml	codecov.yml	Ignore patch coverage since it fails even for no change	Aug 20, 2018
conftest.py	conftest.py	rc 1.5.0 skip neuron-requiring tests unless explicit opt-in	Feb 17, 2020
coveragerc	coveragerc	ABS-161 add test utilities to coveragerc omit	Nov 16, 2017
deploy_notes.txt	deploy_notes.txt	IT-10246; add .nojekyll file so _static assets are visible on github.io	May 8, 2015
dev_requirements.txt	dev_requirements.txt	Adds script to run notebooks and catch any errors	Nov 18, 2022
doc_requirements.txt	doc_requirements.txt	Update read the docs build file	Nov 10, 2023
notebook_requirements.txt	notebook_requirements.txt	library on pypi is called scikit-learn, not sklearn	Dec 13, 2022
pull_request_template.md	pull_request_template.md	Fixed small things for better communication	May 29, 2020
requirements.txt	requirements.txt	exclude failed version ranges from hdmf	Sep 8, 2023
setup.cfg	setup.cfg	remove poetry related setup config	Aug 10, 2023
setup.py	setup.py	remove poetry related setup config	Aug 10, 2023
test_requirements.txt	test_requirements.txt	Check for non-zero df length.	Aug 8, 2023

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The Allen SDK

This repository contains code for processing and analyzing data in the Allen Brain Atlas.

Please visit http://alleninstitute.github.io/AllenSDK for more information.

We welcome contributions! See the contribution guide here. See here for the list of authors.

If you have more general questions or comments about the AllenSDK please post them to the Allen Brain Map Community Forum.

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