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proteome-phenome-atlas Public
Forked from jasonHKU0907/proteome-phenome-atlas -
TimeSeriesAnalysis Public
Forked from Ylefol/TimeSeriesAnalysisLongitudinal Transcriptomic TimeSeriesAnalysis is a transcriptomic analysis tool for both RNA sequencing and microarray data
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CellWhisperer Public
Forked from epigen/CellWhispererCellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
Jupyter Notebook GNU General Public License v3.0 UpdatedOct 18, 2024 -
omicverse Public
Forked from Starlitnightly/omicverseA python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
Jupyter Notebook GNU General Public License v3.0 UpdatedOct 17, 2024 -
HR-from-ECG Public
Forked from soheilkooklan/HR-from-ECGThis project uses Python to process electrocardiogram (ECG or EKG) signals and calculate heart rate (HR) through biomedical signal processing techniques. It includes noise filtering and R-peak dete…
Python MIT License UpdatedOct 9, 2024 -
TrialEmulation Public
Forked from Causal-LDA/TrialEmulationR Apache License 2.0 UpdatedSep 9, 2024 -
Mime Public
Forked from l-magnificence/MimeMachine learning-based integration model with elegant performance
R Other UpdatedJul 26, 2024 -
scCancer Public
Forked from wguo-research/scCancerA package for automated processing of single cell RNA-seq data in cancer
R UpdatedMay 24, 2024 -
marugoto Public
Forked from KatherLab/marugotoTools to build deep learning pipelines.
Python MIT License UpdatedApr 3, 2024 -
FAE Public
Forked from salan668/FAEFeAture Explorer
Python GNU General Public License v3.0 UpdatedFeb 17, 2024 -
MedSAM Public
Forked from bowang-lab/MedSAMSegment Anything in Medical Images
Jupyter Notebook Apache License 2.0 UpdatedFeb 3, 2024 -
awesome-omics Public
Forked from flowhub-team/awesome-omicsA collection of awesome things regarding all omics.
MIT License UpdatedJan 23, 2024 -
ehrapy Public
Forked from theislab/ehrapyElectronic Health Record Analysis with Python.
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lungmask Public
Forked from JoHof/lungmaskAutomated lung segmentation in CT
Python Apache License 2.0 UpdatedJan 6, 2024 -
LungTumorMask Public
Forked from VemundFredriksen/LungTumorMaskAutomatic end-to-end lung tumor segmentation from CT images.
Python MIT License UpdatedDec 27, 2023 -
TESLA Public
Forked from jianhuupenn/TESLADeciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA
Jupyter Notebook MIT License UpdatedDec 19, 2023 -
BioEnricher Public
Forked from Zaoqu-Liu/BioEnricherIntegrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
HTML UpdatedDec 16, 2023 -
Megatron-LM Public
Forked from NVIDIA/Megatron-LMOngoing research training transformer models at scale
Python Other UpdatedDec 10, 2023 -
SurvIAE Public
Forked from Nicolik/SurvIAESurvIAE: Survival prediction with Interpretable Autoencoders
R GNU General Public License v3.0 UpdatedDec 4, 2023 -
kernelshap Public
Forked from ModelOriented/kernelshapEfficient R implementation of SHAP
R GNU General Public License v2.0 UpdatedDec 3, 2023 -
BestSurvivalCuts Public
Forked from paytonyau/BestSurvivalCutsOptimal number and locations of cutpoints for survival analysis.
R UpdatedNov 24, 2023 -
lazypredict Public
Forked from shankarpandala/lazypredictLazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning
Python MIT License UpdatedNov 17, 2023 -
lime Public
Forked from marcotcr/limeLime: Explaining the predictions of any machine learning classifier
JavaScript BSD 2-Clause "Simplified" License UpdatedOct 25, 2023 -
musicatk Public
Forked from campbio/musicatkMutational Signature Comprehensive Analysis Toolkit
R UpdatedOct 16, 2023 -
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r-course-material Public
Forked from ccs-amsterdam/r-course-materialA collection of R tutorials
HTML Other UpdatedOct 3, 2023 -
CellChat Public
Forked from sqjin/CellChatR toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
R GNU General Public License v3.0 UpdatedSep 28, 2023 -
LLD-MMRI2023 Public
Forked from LMMMEng/LLD-MMRI2023[MICCAI2023 Challenge] Liver Lesion Diagnosis Challenge on Multi-phase MRI
Python UpdatedSep 18, 2023