Uhlmann Group
Work of the Uhlmann Group at UZH (Switzerland) and EMBL-EBI (UK)
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- Switzerland
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- Foci-Detection-Workflow Public
Workflow for detection of foci with cellpose and classical bioimage analysis
uhlmanngroup/Foci-Detection-Workflow’s past year of commit activity - MorphoDynamicsPipe Public
A library that uses snakemake to run a morphodynamics analysis on images of cells or nuclei..
uhlmanngroup/MorphoDynamicsPipe’s past year of commit activity - spatial_axis Public
uhlmanngroup/spatial_axis’s past year of commit activity - ShapeEmbedLite Public
ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis
uhlmanngroup/ShapeEmbedLite’s past year of commit activity - ShapeEmbed Public
ShapeEmbed: a self-supervised representation learning framework for 2D shape analysis
uhlmanngroup/ShapeEmbed’s past year of commit activity - ConvertBinaryMasksToDMs Public
Binary mask to distance matrix conversion for downstream shape analysis
uhlmanngroup/ConvertBinaryMasksToDMs’s past year of commit activity - imagequantification101 Public
uhlmanngroup/imagequantification101’s past year of commit activity - consecutive_spatial_data Public
uhlmanngroup/consecutive_spatial_data’s past year of commit activity
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