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Issues with VFDB Integration and Gene Detection in Abricate

question

Status: Open.

#207 In tseemann/abricate;

· mirulee opened on Mar 18, 2024

coverage in Abricate

enhancement

question

Status: Open.

#205 In tseemann/abricate;

· Hedi65 opened on Jan 21, 2024

problems updating the database : HTTP Result: 501

bug

Status: Open.

#193 In tseemann/abricate;

· youngDouble opened on Nov 13, 2022

GFF?

enhancement

Status: Open.

#187 In tseemann/abricate;

· lskatz opened on Jul 1, 2022

question about GAPS column

question

Status: Open.

#183 In tseemann/abricate;

· naikd0 opened on May 25, 2022

Could abricate output a fasta file including all the reference sequences had been screened?

enhancement

Status: Open.

#143 In tseemann/abricate;

· mingjuhao opened on May 16, 2020

Samples missing in output when no hits are found

enhancement

Status: Open.

#141 In tseemann/abricate;

· ireneortega opened on May 15, 2020

Parameters to consider absence/presence of genes in summary report

enhancement

Status: Open.

#140 In tseemann/abricate;

· ireneortega opened on May 14, 2020

Issues identifying small genes

question

Status: Open.

#137 In tseemann/abricate;

· TomLawrence1000 opened on May 3, 2020

Custom database size limit

bug

Status: Open.

#135 In tseemann/abricate;

· Julie-bio opened on Apr 17, 2020

Update the synopsis

bug

Status: Open.

#134 In tseemann/abricate;

· linsalrob opened on Apr 13, 2020

Add some sort of SCORE column

enhancement

Status: Open.

#124 In tseemann/abricate;

· tseemann opened on Feb 12, 2020