Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
MingChen0919 authored Jan 23, 2017
1 parent 00a26c0 commit 4cecd99
Showing 1 changed file with 16 additions and 1 deletion.
17 changes: 16 additions & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,8 @@ This is an extension module for the Tripal project.
5. [Loading Expression Data](#loading-expression-data)
6. [Viewing Data](#viewing-data)
7. [Administrative Pages](#administrative-pages)
8. [Example Files](#example-files)
8. [2D heatmap](#2d-heatmap)
9. [Example Files](#example-files)

# Introduction
Tripal Analysis: Expression is a [Drupal](https://www.drupal.org/) module built to extend the functionality of the [Tripal](http://tripal.info/) toolset.
Expand Down Expand Up @@ -246,6 +247,20 @@ The display of expression data on feature pages can be configured. To configure
* **Expession Column Width** - Change the size of the width of the tile or column in the figure. Value must be 15 or greater.
* **Default Heatmap Display** - The default display can be either a one dimensional heatmap or a bar chart.

# 2D heatmap

The module also provides two blocks (**input_features** and **heatmap_features**) for generating and displaying 2D heatmaps of a list of genes. You can go to **structure**->**blocks** to configure these to blocks. The heatmap is generated with the plotly javascript library.

### Interface for feature input

![feature input](https://cloud.githubusercontent.com/assets/1262709/22209610/2500f872-e155-11e6-9f9d-b3c14e73ed27.png)

### Interface for displaying 2D heatmap

![heatmap](https://cloud.githubusercontent.com/assets/1262709/22209619/28b5466c-e155-11e6-87cb-4eb69f973605.png)



# Example Files

### Biomaterial Loader
Expand Down

0 comments on commit 4cecd99

Please sign in to comment.