Therapeutics Commons (TDC-2): Multimodal Foundation for Therapeutic Science

cBioPortal for Cancer Genomics

Precision Medicine Knowledge Graph (PrimeKG)

TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

High performance data storage for importing, querying and transforming variants.

Extended Joint Models for Longitudinal and Survival Data

📦 Non-parametric Causal Effects Based on Modified Treatment Policies 🔮

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)

Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer

mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

An Artificial Neural Network-based discriminator for validating clinically significant genomic variants

Methods for subgroup identification / personalized medicine / individualized treatment rules

Text mining cancer biomarkers for the CIVIC database

Patient-Specific Modeling in Python

Initial data release for drug-target interactions of the cancer targetome.

Subclassification of disease states based on the intersection of literature and expression

Model-Informed Precision Dosing (MIPD) with R

Unified Clinical Vocabulary Embeddings for Advancing Precision Medicine

WebGen Vertically Integrated Project