This repository contains all CWL descriptions of the MGnify pipeline version 5.0.

Dadaist2 🟨 Highway to R

Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.

A web app for environmental DNA metabarcoding analysis

amplicon analysisng pipelines based on luigi with qiime2-dada2/ qiime2-deblur/vsearch/usearch

A pipeline to analyse marine fish amplicon data

Snakemake version of QIIME2

Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers.