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  • Plant and Food Research
  • Lincoln

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  1. TE_ExpressionCandidate TE_ExpressionCandidate Public

    A repo for the scripts used in the manuscript "Comprehensive analysis of both long and short read transcriptomes of a clonal and a seed-propagated model plant species reveal the prerequisites for t…

    R 2

  2. sandpit sandpit Public

    Forked from PlantandFoodResearch/sandpit

    A demonstration repository

    Jupyter Notebook

  3. TEgenomeSimulator-open TEgenomeSimulator-open Public

    Forked from Plant-Food-Research-Open/TEgenomeSimulator

    TEgenomeSimulator: A tool to simulate TE mutation and insertion into a random-synthesised or user-provided genome.

    Python

  4. TESS TESS Public

    Forked from cwb14/PrinTE

    A Forward Simulation Framework for Studying the Role of Transposable Elements in Genome Expansion and Contraction

    Python

  5. calisim-examples-workshop-material calisim-examples-workshop-material Public

    Forked from Plant-Food-Research-Open/calisim-examples-workshop-material

    Jupyter Notebook

  6. moiraine moiraine Public

    Forked from Plant-Food-Research-Open/moiraine

    An R package to construct Multi-Omics Integration Reproducible Analyses in R.

    R