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@sys-bio

UW Sauro Lab

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  1. tellurium tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    Python 108 36

  2. roadrunner roadrunner Public

    Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    C++ 39 25

Repositories

Showing 10 of 108 repositories
  • AntimonyEditor Public

    Antimony Web Editor: A Web Editor for the Antimony Modeling Language

    sys-bio/AntimonyEditor’s past year of commit activity
    TypeScript 0 MIT 1 15 1 Updated Nov 1, 2024
  • BiomodelsCache Public

    A biomodels cache for faster lookup.

    sys-bio/BiomodelsCache’s past year of commit activity
    Python 0 CC0-1.0 1 0 0 Updated Nov 1, 2024
  • SBMLNetwork Public Forked from adelhpour/SBMLNetwork

    SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

    sys-bio/SBMLNetwork’s past year of commit activity
    C++ 0 MIT 2 0 0 Updated Nov 1, 2024
  • SimBioUI Public

    Web systems biology simulator

    sys-bio/SimBioUI’s past year of commit activity
    JavaScript 0 MIT 2 3 0 Updated Oct 31, 2024
  • PaperSummaryDataset Public

    A workflow for generating summaries of research papers on biological models using generative AI.

    sys-bio/PaperSummaryDataset’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 30, 2024
  • roadrunner Public Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    sys-bio/roadrunner’s past year of commit activity
    C++ 39 33 71 (1 issue needs help) 2 Updated Oct 24, 2024
  • ratesb_python Public

    Analysis of rate laws in reaction networks.

    sys-bio/ratesb_python’s past year of commit activity
    Python 0 MIT 0 5 0 Updated Oct 14, 2024
  • libroadrunner-deps Public

    Dependencies for libroadrunner

    sys-bio/libroadrunner-deps’s past year of commit activity
    CMake 3 5 0 0 Updated Oct 12, 2024
  • nleq2 Public
    sys-bio/nleq2’s past year of commit activity
    C 0 0 0 0 Updated Oct 12, 2024
  • OcillatorDatabase Public

    Database of oscillatory chemical network models. Written in Antimony.

    sys-bio/OcillatorDatabase’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 9, 2024
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