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Checkpoint with uncreatable input cannot goes on

bugSomething isn't workingSomething isn't working

Status: Open.

#3870 In snakemake/snakemake;

· Hocnonsense opened on Dec 8, 2025

name directive is "screwed" up

bugSomething isn't workingSomething isn't working

Status: Open.

#3869 In snakemake/snakemake;

· jd3234 opened on Dec 8, 2025

<code>report_href</code> generates broken links because it doesn't match Snakemake's shortened report paths

bugSomething isn't workingSomething isn't working

Status: Open.

#3867 In snakemake/snakemake;

· kaniandr opened on Dec 6, 2025

How to use snakemake in kubernetes?

Status: Open.

#3865 In snakemake/snakemake;

· 09oulin opened on Dec 6, 2025

"Second Order" checkpoints are not correctly handled

bugSomething isn't workingSomething isn't working

Status: Open.

#3862 In snakemake/snakemake;

· jackerschott opened on Dec 5, 2025

apptainer not recognized but singular command is

bugSomething isn't workingSomething isn't working

Status: Open.

#3860 In snakemake/snakemake;

· wintermutant opened on Dec 4, 2025

<code>snakemake --version</code> does not match tagged docker images

Status: Open.

#3859 In snakemake/snakemake;

· broomej opened on Dec 3, 2025

Reasonable "quiet" option

enhancementNew feature or requestNew feature or request

Status: Open.

#3856 In snakemake/snakemake;

· Psirus opened on Dec 1, 2025

Job submission with scheduler broken by #3850

bugSomething isn't workingSomething isn't working

Status: Open.

#3853 In snakemake/snakemake;

· ASLeonard opened on Dec 1, 2025

Storage plugin initialization loads heavy dependencies (e.g., XRootD) during CLI startup

bugSomething isn't workingSomething isn't working

enhancementNew feature or requestNew feature or request

Status: Open.

#3847 In snakemake/snakemake;

· Hocnonsense opened on Nov 25, 2025

Add ability to propagate shell command exit codes

enhancementNew feature or requestNew feature or request

Status: Open.

#3845 In snakemake/snakemake;

· radusuciu opened on Nov 22, 2025

Clearer error when using checkpoints in parameter function.

enhancementNew feature or requestNew feature or request

Status: Open.

#3842 In snakemake/snakemake;

· jlumpe opened on Nov 20, 2025