[MINOR] Update mzml to xic nomenclature everywhere, python scripts, m…

…anuals and vignettes
shubham1637 · Feb 20, 2021 · 2cbf21a · 2cbf21a
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Showing 27 changed files with 111 additions and 111 deletions.
diff --git a/man/alignTargetedRuns.Rd b/man/alignTargetedRuns.Rd
diff --git a/man/alignTargetedRuns2.Rd b/man/alignTargetedRuns2.Rd
diff --git a/man/alignToMaster.Rd b/man/alignToMaster.Rd
diff --git a/man/createMZML.Rd b/man/createMZML.Rd
diff --git a/man/extractXIC_group.Rd b/man/extractXIC_group.Rd
diff --git a/man/extractXIC_group2.Rd b/man/extractXIC_group2.Rd
diff --git a/man/filenamesFromMZML.Rd b/man/filenamesFromMZML.Rd
diff --git a/man/filenamesFromOSW.Rd b/man/filenamesFromOSW.Rd
diff --git a/man/getAlignObjs.Rd b/man/getAlignObjs.Rd
diff --git a/man/getChromatogramIndices.Rd b/man/getChromatogramIndices.Rd
diff --git a/man/getNodeRun.Rd b/man/getNodeRun.Rd
diff --git a/man/getOswAnalytes.Rd b/man/getOswAnalytes.Rd
diff --git a/man/getOswFiles.Rd b/man/getOswFiles.Rd
diff --git a/man/getRunNames.Rd b/man/getRunNames.Rd
diff --git a/man/getXICs.Rd b/man/getXICs.Rd
diff --git a/man/plotAnalyteXICs.Rd b/man/plotAnalyteXICs.Rd
diff --git a/man/progAlignRuns.Rd b/man/progAlignRuns.Rd
diff --git a/man/progAlignRuns2.Rd b/man/progAlignRuns2.Rd
diff --git a/man/readMzMLHeader.Rd b/man/readMzMLHeader.Rd
diff --git a/man/readSqMassHeader.Rd b/man/readSqMassHeader.Rd
diff --git a/man/recalculateIntensity.Rd b/man/recalculateIntensity.Rd
diff --git a/man/traverseDown.Rd b/man/traverseDown.Rd
diff --git a/man/traverseUp.Rd b/man/traverseUp.Rd
diff --git a/man/uncompressVec.Rd b/man/uncompressVec.Rd