Release v0.5.7

What's Changed

• fix: support for nextflow env vars in params by @ejseqera in #244
• fix: merging of params into single params file by @ejseqera in #248
• refactor: modernize CLI with Typer by @edmundmiller in #249
• feat: add support for targetting resources by name by @ejseqera in #257
• feat: upgrade to Python 3.10 and modernize codebase by @ejseqera in #259
• fix: datasets resolution to url by @ejseqera in #260
• feat: support lists and maps in params block by @ejseqera in #261
• feat: fix duplicate name validation across workspaces by @ejseqera in #262

Full Changelog: v0.5.6...v0.5.7

Release v0.5.6

What's Changed

• Improve documentation for Fusion Snapshots by @edmundmiller in #235
• Fix verbose mode support by @ejseqera in #239
• ci: bump CLI version by @ejseqera in #241

Full Changelog: v0.5.5...v0.5.6

Release v0.5.5

What's Changed

• fix: on_exists inside YAML files is respected by @adamrtalbot in #224
• feat: Remove null values from YAML input files by @adamrtalbot in #223
• feat: Handle multiple workspaces when using overwrite behaviour by @adamrtalbot in #222
• fix: support for updating member roles in orgs by @ejseqera in #228
• feat: add support for setting CEs to primary by @ejseqera in #226
• Switch to pyproject.toml and UV by @edmundmiller in #179
• Update uv docs by @ejseqera in #231
• docs: update params in ce config by @ejseqera in #233

New Contributors

• @edmundmiller made their first contribution in #179

Full Changelog: v0.5.4...v0.5.5

Release v0.5.4

What's Changed

• add on_exists param with behaviour fail, ignore and overwrite by @adamrtalbot in #207
• feat: update studios template and add example by @ejseqera in #211
• feat: resolve dataset names to urls if in params dict by @ejseqera in #210
• fix: remove deprecated arg from overwrite flag by @ejseqera in #218
• Update e2e workflow testing by @ejseqera in #219

Full Changelog: v0.5.3...v0.5.4

Release v0.5.3

What's Changed

• feat: add support for studios and data-links by @ejseqera in #202

Full Changelog: v0.5.2...v0.5.3

Release v0.5.2

What's Changed

• fix: orgs and teams overwrite behaviour when resolving env vars by @ejseqera in #197
• feat: Add experimental global overwrite option by @ejseqera in #198
• ci: fix revision used for rnaseq in tower actions by @ejseqera in #200

Full Changelog: v0.5.1...v0.5.2

Release v0.5.1

What's Changed

• fix: Correctly catches and raises errors from tw cli by @adamrtalbot in #183
• Alt find yaml files recursively by @ejseqera in #186
• Recursively find yaml files in directories by @adamrtalbot in #184
• Use params file for environment variables by @adamrtalbot in #182
• Draft: add support for a variables file as input for templating by @ejseqera in #181
• fix: support for multiple cli args provided via cli by @ejseqera in #187
• Document use of environment variables in the README.md by @adamrtalbot in #189
• fix: parsing of vars in input file with existing env by @ejseqera in #188
• Fix typo in docs by @ejseqera in #191
• fix: catch and handle all non-zero exit codes by @ejseqera in #195
• Clean up traceback returned from info command error by @ejseqera in #196

Full Changelog: v0.5.0...v0.5.1

Release v0.5.0

What's Changed

• feat(SeqeraPlatform): seqerakit can write JSON to stdout for detailed records by @adamrtalbot in #146
• fix: handling for API vars and escaped vars by @ejseqera in #171
• fix: handling for overwrite class without json output by @ejseqera in #172
• FIx handling of resource creation error when emitting JSON output by @ejseqera in #173
• fix: add correct handling for windows env vars by @ejseqera in #164
• Fix support for user/personal workspaces by @ejseqera in #174
• ci: update CI to include AWS batch CE from source by @ejseqera in #176

Full Changelog: v0.4.9...v0.5.0

Release v0.4.9

What's Changed

• fix: remove defaults channel from install and build by @ejseqera in #155
• fix: add handling for empty strings in key-value pairs of yaml by @ejseqera in #154
• add code commit credentials to examples by @schaluva in #153
• fix: improve logic to respect cli and dryrun flags with info by @ejseqera in #156
• Report success and failures better in seqerakit by @ejseqera in #157
• Add targets flag to specify resources for creation in input YAML by @ejseqera in #158
• docs: add docs for targets flag by @ejseqera in #159

New Contributors

• @schaluva made their first contribution in #153

Full Changelog: v0.4.8...v0.4.9

Release v0.4.8

What's Changed

• fix path to logo by @maxulysse in #142
• fix: type error when using params dict in yaml by @ejseqera in #145

New Contributors

• @maxulysse made their first contribution in #141

Full Changelog: v0.4.7...v0.4.8