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Sc 45 instanseg #85

Merged
merged 8 commits into from
Jan 22, 2025
Merged

Sc 45 instanseg #85

merged 8 commits into from
Jan 22, 2025

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ArneDefauw
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  • adapt instanseg notebook, so it works with version of instanseg as in main branch
  • move hp.im.instanseg_callable to public API
  • write to intermediate zarr store in hp.im.labels to reduce ram memory and efficient processing
  • write to intermediate zarr store if len( output_labels_layer) > 1 in hp.im.segment

@ArneDefauw ArneDefauw merged commit 20e5ac9 into main Jan 22, 2025
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