linting

pavanvidem · Sep 18, 2023 · 92d5ff3 · 92d5ff3
1 parent 9ad6b6c
commit 92d5ff3
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/tools/abyss/abyss-pe.xml b/tools/abyss/abyss-pe.xml
@@ -228,7 +228,7 @@ k=$k
     </outputs>
 
     <tests>
-        <test>
+        <test expect_num_outputs="5">
             <repeat name="lib_repeat">
                 <conditional name="reads">
                     <param name="reads_selector" value="paired" />
@@ -243,14 +243,14 @@ k=$k
             <output name="indels" file="empty_file.fasta" />
             <output name="stats" file="abyss-stats1.tab" />
         </test>
-        <test>
+        <test expect_num_outputs="3">
             <param name="se_reads" ftype="fastq.gz" value="assembly_sample-R1.fastq.gz,assembly_sample-R2.fastq.gz" />
             <param name="k" value="50" />
             <output name="unitigs" file="abyss-unitigs2.fa" />
             <output name="indels" file="empty_file.fasta" />
             <output name="stats" file="abyss-stats2.tab" />
         </test>
-        <test>
+        <test expect_num_outputs="4">
             <param name="se_reads" ftype="fasta" value="assembly_sample-R1.fasta,assembly_sample-R2.fasta" />
             <param name="long_seqs" ftype="fasta" value="assembly_sample-R2.fasta" />
             <param name="k" value="50" />