loess 1.3.5
Install from the command line:
Learn more about npm packages
$ npm install @datamade/loess@1.3.5
Install via package.json:
"@datamade/loess": "1.3.5"
About this version
JavaScript implementation of the Locally-Weighted Regression package originally written in C by Cleveland, Grosse and Shyu (1992)
First install the package:
npm install loess --save
Load in your data:
var data = require('./myData.json')
Instantiate a LOESS model with the data:
var Loess = require('loess')
var options = {span: 0.5, band: 0.8, degree: 1}
var model = new Loess(data, options)
Fit model by calling the .predict( ) method on the model object:
var fit = model.predict()
console.log(fit.fitted)
// do something else with fit.fitted
To fit model on a new set of points, pass a data object into .predict( )
var newData = {
x: [1, 2, 3, 4, 5],
x2: [6, 7, 8, 9, 10]
}
fit = model.predict(newData)
var upperLimit = fit.fitted.map((yhat, idx) => yhat + fit.halfwidth[idx])
var lowerLimit = fit.fitted.map((yhat, idx) => yhat - fit.halfwidth[idx])
// plot upperLimit and lowerLimit
Alternatively, use .grid( ) method to generate a grid of equally spaced points:
newData = model.grid([20, 20])
fit = model.predict(newData)
class Loess {
constructor (data: object, options: object) {
// arguments
data /*required*/ = {
y: [number],
x: [number],
x2: [number], // optional
w: [number] // optional
}
options /*optional*/ = {
span: number, // 0 to inf, default 0.75
band: number, // 0 to 1, default 0
degree: [0, 1, 2] || ['constant', 'linear', 'quadratic'] // default 2
normalize: boolean, // default true if degree > 1, false otherwise
robust: boolean, // default false
iterations: integer //default 4 if robust = true, 1 otherwise
}
// return a LOESS model object with the following properties
this.y = data.y
this.x = [data.x, data.x2] // predictor matrix
this.n = this.y.length // number of data points
this.d = this.x.length // dimension of predictors
this.bandwidth = options.span * this.n // number of data points used in local regression
this.options = options
}
predict (data: object) {
// arguments
data /*optional*/ = {
x: [number],
x2: [number]
} // default this.x
return {
fitted: [number], // fitted values for the specified data points
halfwidth: [number] // fitted +- halfwidth is the uncertainty band
}
}
grid (cuts: [integer]) {
return {
x_cut: [number], // equally-spaced data points
x_cut2: [number],
x: [number], // all combination of x_cut and x_cut2, forming a grid
x2: [number]
}
}
}
- data should be passed into the constructor function as json with keys y, x and optionally x2 and w. Values being the arrays of response, predictor variables, and observation weights.
- If no data is supplied to .predict( ) method, default is to perform fitting on the original dataset the model is constructed with.
- span refers to the percentage number of neighboring points used in local regression.
- band specifies how wide the uncertainty band should be. The higher the value, the greater number of points encompassed by the uncertainty band. Setting to 0 will return only fitted values.
- By default LOESS model will perform local fitting using the quadratic function. Overwrite this by setting the degree option to "linear" or "constant". Lower degree fitting function computes faster.
- For multivariate data, normalize option defaults to true. This means normalization is applied before performing proximity calculation. Data is transformed by dividing the factors by their 10% trimmed sample standard deviation. Turn off this option if dealing with geographical data.
- Set robust option to true to turn on iterative robust fitting procedure. Applicable for estimates that have non-Gaussian errors. More iterations requires longer computation time.
- When using .grid( ), cuts refers to the number of equally spaced points required along each axis.
William S. Cleveland, Susan J. Devlin
Locally Weighted Regression: An Approach to Regression Analysis by Local Fitting
Journal of the American Statistical Association, Vol. 83, No. 403. (Sep., 1988), pp. 596-610.
William S. Cleveland, Eric Grosse, Ming-Jen Shyu
A Package of C and Fortran Routines for Fitting Local Regression Models (20 August 1992)
Source code available at http://www.netlib.org/a/dloess