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    5 repositories

    • scDisInFact

      Public
      scDisInFact is a single-cell data integration and condition effect prediction framework
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•7•1•0•Updated Sep 19, 2024Sep 19, 2024

    • scMultiSim_manuscript

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Sep 2, 2024Sep 2, 2024

    • scMultiSim

      Public
      A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.
      R
      •5•22•3•0•Updated Aug 31, 2024Aug 31, 2024

    • EpiPack

      Public
      A single-cell ATAC-seq integration, reference mapping and cell type annotation tool without aligned peak.
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Apr 9, 2024Apr 9, 2024

    • LinRace

      Public
      single cell lineage reconstruction using paired lineage barcode and gene expression data
      R
      •
      MIT License
      •0•5•0•1•Updated Jan 9, 2024Jan 9, 2024