Repositories list

• pyopls

  Public
  A Python 3 implementation of orthogonal projection to latent structures

  feature-selectionmetabolomicschemometrics+ 2partial-least-squares-regressionorthogonal-signal-correction

  Python

  •

  MIT License

  •17•62•4•1•Updated Feb 22, 2024Feb 22, 2024

• Omics-Dashboard

  Public
  A tool for managing (primarily numeric) multiomics data such as microarray data, spectroscopy, etc.

  Python

  •

  MIT License

  •0•2•0•0•Updated Oct 24, 2022Oct 24, 2022

• locality-sensitive-deep-learner

  Public
  Deep learner with attention mechanism for locally-linear data

  Jupyter Notebook

  •0•1•0•0•Updated Aug 23, 2021Aug 23, 2021

• jcamp

  Public
  A set of Python utilities for reading JCAMP-DX files.

  Python

  •

  MIT License

  •31•0•0•0•Updated Aug 21, 2020Aug 21, 2020

• Omics-Dashboard-Python-Client

  Public
  A Python (3.4+ or 2.7) package for interfacing with an Omics Dashboard (https://github.com/BiRG/Omics-Dashboard) web service.

  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 15, 2020Jul 15, 2020

• chemometrics-tools

  Public
  Assorted chemometric tools for internal use (primarily for NMR metabolomics).

  Python

  •

  MIT License

  •0•1•0•0•Updated Mar 20, 2020Mar 20, 2020

• Metabolomics-Analysis-Toolbox

  Public archive
  MATLAB

  •0•4•43•0•Updated Oct 22, 2019Oct 22, 2019

• cromwell-frontend

  Public archive
  A web front-end for the Cromwell job server, including authentication via PAM and rudimentary management of workflow definitions.

  Python

  •

  MIT License

  •0•5•0•0•Updated Sep 4, 2019Sep 4, 2019

• Omics-Dashboard-MATLAB-Client

  Public
  A collection of MATLAB scripts for interfacing with an Omics Dashboard (https://github.com/BiRG/Omics-Dashboard) service.

  MATLAB

  •

  MIT License

  •0•0•0•0•Updated Aug 20, 2019Aug 20, 2019

• cwltool

  Public archive
  Common Workflow Language reference implementation

  Python

  •

  Apache License 2.0

  •231•0•0•0•Updated Aug 16, 2018Aug 16, 2018

• slim-docker-images

  Public archive
  Minimized docker images for bioinformatics tools.

  0•0•0•0•Updated May 30, 2018May 30, 2018

• atrc-pytorch

  Public archive
  Jupyter Notebook

  •5•0•0•0•Updated May 30, 2018May 30, 2018

• metaboscribe

  Public archive
  JavaScript

  •0•0•0•0•Updated Mar 26, 2018Mar 26, 2018

• PICNIC_revision

  Public archive
  Wright State University Bioinformatics Research Group PICNIC revision

  MATLAB

  •0•3•0•0•Updated Jun 24, 2013Jun 24, 2013

• HomoloGenie

  Public archive
  An application for the study of Homologous Genes

  Ruby

  •0•0•0•0•Updated Mar 22, 2013Mar 22, 2013

• Vertebrae

  Public archive
  A library for accessing the NCBI Entrez Database and Query System

  Ruby

  •0•0•0•0•Updated Feb 18, 2013Feb 18, 2013

• Proteus

  Public archive
  JavaScript

  •0•0•0•0•Updated Jan 24, 2013Jan 24, 2013

• Metabolomics-Laboratory-Information-and-Management-System

  Public archive
  Python

  •0•0•0•0•Updated Sep 22, 2011Sep 22, 2011

• NMR-Training-and-Testing-Data-Sets

  Public archive
  Objective-C

  •0•1•0•0•Updated Sep 5, 2011Sep 5, 2011

• Immune-System-Model

  Public archive
  Objective-C

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•0•0•Updated Apr 26, 2011Apr 26, 2011