Release v0.4.1

Release version 0.4.1. Minor fix to be gig-lot 3.5 compatible

Release v0.4

This release we have:

• added notes that we are deprecating visr.survfit() and visr.tidycuminc(), recommending the use of {ggsurvfit} instead.
• Minor edit to documentation in vis.R to remove a note due to an itemized list.

Release 0.3.1

Minor patch to resolve failing test on cran.
visR_0.3.1.tar.gz

What's Changed

• Record cran sub by @bailliem in #431
• Release 0.3 by @bailliem in #432
• 433 correct readme install develop to main by @bailliem in #434
• Update/readme by @SHAESEN2 in #436
• Zooming in on figure with coord_cartesean() by @ddsjoberg in #437
• Adding step ribbon function in add_CI() by @ddsjoberg in #440
• add visR namespace to step_ribbon function call re issue #449 by @bailliem in #450
• Survival version update by @ddsjoberg in #453
• 454 release visr 031 by @bailliem in #455

Full Changelog: v0.3.0...v0.3.1

visR 0.3.0

New functions

• Highlight specific strata in survival plots using add_highlight().

• Indicate quantiles in survival plots using add_quantiles().

• Estimation of cumulative incidence in the presence of competing risks is now possible with estimate_cuminc(). The risk estimates can be plotted similarly to estimates from estimate_KM() using the visr() function.

• Function Surv_CNSR() used the CDISC ADTTE conventions for the default values of the time and status indicators for time-to-event analyses. Of note, the status variable must be coded as 0/1 with 1 indicating an observation has been censored. (#391)

Breaking Changes

• AlignPlots() has been renamed to align_plots().

Bug Fixes

• Fix in get_pvalue() for estimate_KM() objects when data piped in with modifications (e.g. dplyr::filter(), dplyr::mutate()).

• Fix in add_risktable() with estimates being assigned the incorrect label.

• Review unit testing for estimate_KM(formula=) argument. (#399)

• Fixed bug in define_theme(strata=). (#388)

• Fix a discrepancy issue when saving survfit() call in estimate_KM(). (#365)

• Added check for no class(x)== . (#358)

• Fix the documentation of the S3 method visr(). (#301)

Other Updates

• Stratifying variable names have been removed from legend in visr.survfit() figures, and the legend title now describes the stratifying variable(s). (#343)

• The estimate_KM() function gains an experimental formula= argument. When the argument is used, the AVAL, CNSR, and strata arguments typically used to construct the formula are ignored. (#379)

• add_risktable has a rowgutter argument to allow spacing between plot and risktables

• The strata variable is now removed from the body of tableone() results. (#254)

• The visr.survfit() function no longer warns about x-axis label when PARAM column not found in original data set. (#378)

• The call saved in the estimate_KM() object has been updated to a quosure--ensuring the original function call can always be recalled.

• define_theme()updated to ensure that only the strata present in the theme are displayed. (#388)

• Removed the external dependency with the easyalluvial package. (#383)

• Reduced the number of exported functions. (#381)

• Improved documentation for visr() and other generic functions. (#301) (#357)

• Unit testing updated where relevant to have 100% code coverage and function requirements tested.

• The README page has been updated with additional examples. (#425)

• lifecycle badges have been added at the function level to indicate functions that are still in experimental or questioning phases. (#398)

visR 0.2.0

First cran release of visR v0.2.0. 14th June 2021.