CI #1173
Workflow file for this run
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| name: CI | ||
| 'on': | ||
| pull_request: null | ||
| workflow_dispatch: null | ||
| concurrency: | ||
| group: '${{ github.workflow }}-${{ github.ref }}' | ||
| cancel-in-progress: true | ||
| jobs: | ||
| detect-ci-trigger: | ||
| name: detect ci trigger | ||
| runs-on: ubuntu-latest | ||
| if: github.event_name == 'push' || github.event_name == 'pull_request' | ||
| outputs: | ||
| triggered: '${{ steps.detect-trigger.outputs.trigger-found }}' | ||
| steps: | ||
| - uses: actions/[email protected] | ||
| with: | ||
| fetch-depth: 2 | ||
| - uses: xarray-contrib/[email protected] | ||
| id: detect-trigger | ||
| with: | ||
| keyword: '[skip-ci]' | ||
| test: | ||
| name: pytest | ||
| runs-on: ubuntu-latest | ||
| needs: detect-ci-trigger | ||
| if: needs.detect-ci-trigger.outputs.triggered == 'false' || workflow_dispatch is not null | ||
|
Check failure on line 27 in .github/workflows/ci.yaml
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| defaults: | ||
| run: | ||
| shell: 'bash -l {0}' | ||
| steps: | ||
| - uses: actions/[email protected] | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: Set up conda | ||
| uses: conda-incubator/[email protected] | ||
| with: | ||
| auto-update-conda: false | ||
| channels: conda-forge | ||
| miniforge-variant: Mambaforge | ||
| activate-environment: bitinfo | ||
| python-version: '3.11' | ||
| - name: Set up conda environment | ||
| run: | | ||
| mamba env update -f environment.yml | ||
| - name: Conda info | ||
| run: conda info | ||
| - name: Conda list | ||
| run: conda list | ||
| - name: install xbitinfo | ||
| run: | | ||
| pip install . | ||
| - name: Run tests | ||
| run: pytest | ||
| doctest: | ||
| name: doctests | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: 'bash -l {0}' | ||
| steps: | ||
| - uses: actions/[email protected] | ||
| - uses: conda-incubator/[email protected] | ||
| with: | ||
| channels: conda-forge | ||
| miniforge-variant: Mambaforge | ||
| activate-environment: bitinfo | ||
| auto-update-conda: false | ||
| python-version: '3.11' | ||
| - name: Install conda dependencies | ||
| run: | | ||
| mamba env update -f environment.yml | ||
| - name: Install xbitinfo | ||
| run: | | ||
| python -m pip install -e . | ||
| - name: Conda info | ||
| run: conda info | ||
| - name: Conda list | ||
| run: conda list | ||
| - name: Run doctests | ||
| run: | | ||
| python -m pytest --doctest-modules xbitinfo --ignore xbitinfo/tests | ||
| test_notebooks: | ||
| name: notebooks | ||
| runs-on: ubuntu-latest | ||
| needs: detect-ci-trigger | ||
| if: needs.detect-ci-trigger.outputs.triggered == 'false' || workflow_dispatch is not null | ||
| defaults: | ||
| run: | ||
| shell: 'bash -l {0}' | ||
| steps: | ||
| - uses: actions/[email protected] | ||
| - name: Set up conda | ||
| uses: conda-incubator/[email protected] | ||
| with: | ||
| auto-update-conda: false | ||
| channels: conda-forge | ||
| miniforge-variant: Mambaforge | ||
| activate-environment: bitinfo | ||
| python-version: '3.11' | ||
| - name: Set up conda environment | ||
| run: | | ||
| mamba env update -f environment.yml | ||
| - name: Conda info | ||
| run: conda info | ||
| - name: Conda list | ||
| run: conda list | ||
| - name: install xbitinfo | ||
| run: | | ||
| pip install . --upgrade pip | ||
| - name: Test notebooks | ||
| run: > | ||
| python -m ipykernel install --user --name bitinfo | ||
| jupyter nbconvert --to html --execute docs/*.ipynb | ||
| --ExecutePreprocessor.kernel_name=bitinfo | ||
| install: | ||
| name: 'install xbitinfo, ${{ matrix.os }}' | ||
| runs-on: '${{ matrix.os }}' | ||
| needs: detect-ci-trigger | ||
| if: needs.detect-ci-trigger.outputs.triggered == 'false' || workflow_dispatch is not null | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: | ||
| - ubuntu-latest | ||
| - macos-latest | ||
| - windows-latest | ||
| steps: | ||
| - uses: actions/[email protected] | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: Setup python | ||
| uses: actions/[email protected] | ||
| with: | ||
| python-version: '3.11' | ||
| - name: Set up Julia | ||
| uses: julia-actions/[email protected] | ||
| with: | ||
| version: 1.7.1 | ||
| - name: Install dependencies | ||
| run: | | ||
| pip install .[complete] | ||
| python -c "import xbitinfo" | ||
