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trimmomatic fails with propertyexception

bugSomething isn't workingSomething isn't working

Status: Open.

#254 In nf-core/viralmetagenome;

· averagehat opened on Dec 31, 2025

overview-tables are better transposed

enhancementNew feature or requestNew feature or request

Status: Open.

#220 In nf-core/viralmetagenome;

· ammaraziz opened on Sep 23, 2025

Explore capabilities of vclust

enhancementNew feature or requestNew feature or request

Status: Open.

#182 In nf-core/viralmetagenome;

· Joon-Klaps opened on May 21, 2025

·  

Release 1.1.0

Consider switching to CRAM where possible. I think so far the only exception is custom_mpileup

Status: Open.

#168 In nf-core/viralmetagenome;

· Joon-Klaps opened on Mar 21, 2025

Make viralgenie much more memory efficient

enhancementNew feature or requestNew feature or request

Status: Open.

#167 In nf-core/viralmetagenome;

· Joon-Klaps opened on Mar 21, 2025

Make custom annotation database using ncbi virus

documentationImprovements or additions to documentationImprovements or additions to documentation

websiteImprovements or feedback to the viralgenie websiteImprovements or feedback to the viralgenie website

Status: Open.

#137 In nf-core/viralmetagenome;

· Joon-Klaps opened on Jul 19, 2024

include option for protein clustering

enhancementNew feature or requestNew feature or request

Status: Open.

#135 In nf-core/viralmetagenome;

· Joon-Klaps opened on Jul 19, 2024

Split up main test file to smalle nf-test subworkflows

enhancementNew feature or requestNew feature or request

Status: Open.

#114 In nf-core/viralmetagenome;

· Joon-Klaps opened on May 3, 2024

·  

Release 1.1.0

Explore capabalities of COMEBin

enhancementNew feature or requestNew feature or request

Status: Open.

#80 In nf-core/viralmetagenome;

· Joon-Klaps opened on Jan 22, 2024

Include option Varscan2 as variant caller

enhancementNew feature or requestNew feature or request

Status: Open.

#18 In nf-core/viralmetagenome;

· Joon-Klaps opened on Aug 21, 2023