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[ci skip] Merge PR 34566
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Merge PR bioconda#34566, commits were: 
 * Merge branch 'master' into strainscan
 * add strainscan recipes 5
 * add strainscan recipes 4
 * add strainscan recipes 3
 * add strainscan recipes 2
 * add strainscan recipes
 * Merge pull request #1 from bioconda/master

add strainscan recipes
 * add strainscan recipes
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liaoherui authored May 1, 2022
1 parent 6d1af75 commit e175eb2
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51 changes: 51 additions & 0 deletions recipes/strainscan/meta.yaml
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{% set name = "strainscan" %}
{% set version = "1.0.3" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz
sha256: ec4f51274a0b8b47e0c61d4dd9aec8decf7beea0f3037fcf90eeaab049e00142

build:
number: 0
entry_points:
- strainscan = StrainScan.StrainScan:main
- strainscan_build = StrainScan.StrainScan_build:main
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv "
noarch: python

requirements:
host:
- pip
- python ==3.7.3
run:
- python ==3.7.3
- sibeliaz ==1.2.2
- r-base ==4.0.2
- numpy ==1.17.3
- pandas ==1.0.1
- biopython ==1.74
- scipy ==1.3.1
- scikit-learn ==0.23.1
- bidict ==0.21.3
- treelib ==1.6.1

test:
imports:
- StrainScan
commands:
- strainscan --help
- strainscan_build --help

about:
home: https://github.com/liaoherui/StrainScan
license: MIT
license_family: MIT
summary: One efficient and accurate strain-level microbiome composition analysis tool based on reference genomes and k-mers.

extra:
recipe-maintainers:
- liaoherui

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