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Add is_lab_host column to metadata #28

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Oct 16, 2024
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Add is_lab_host column to metadata #28

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251df23
Add is_lab_host column to metadata
j23414 Oct 16, 2024
0013602
Add is_lab_host column to example data
j23414 Oct 16, 2024
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3 changes: 3 additions & 0 deletions ingest/defaults/config.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,7 @@ ncbi_datasets_fields:
- update-date
- length
- host-name
- is-lab-host
- isolate-lineage-source
- bioprojects
- biosample-acc
Expand Down Expand Up @@ -52,6 +53,7 @@ curate:
update-date: date_updated
length: length
host-name: host
is-lab-host: is_lab_host
isolate-lineage-source: sample_type
biosample-acc: biosample_accessions
sra-accs: sra_accessions
Expand Down Expand Up @@ -110,6 +112,7 @@ curate:
'location',
'state',
'host',
'is_lab_host',
#'date_submitted',
#'sra_accession',
#'abbr_authors',
Expand Down
140 changes: 70 additions & 70 deletions phylogenetic/example_data/metadata.tsv
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Original file line number Diff line number Diff line change
@@ -1,70 +1,70 @@
accession date region country division location state host authors latitude longitude url length clade_membership
JF957161 2006-XX-XX North America USA Idaho ID Anez et al. https://www.ncbi.nlm.nih.gov/nuccore/JF957161 11016 SW03
JQ700438 2011-XX-XX North America USA Homo sapiens Anez et al. https://www.ncbi.nlm.nih.gov/nuccore/JQ700438 11016 SW03
JX015523 2010-08-31 North America USA Texas El Paso County TX TX Culex tarsalis Mann et al. https://www.ncbi.nlm.nih.gov/nuccore/JX015523 10997 SW03
KC333375 2012-08-04 North America USA Texas Harris Co. TX Passer domesticus Mann et al. https://www.ncbi.nlm.nih.gov/nuccore/KC333375 10932 SW03
KF704147 2010-08-01 North America USA Arizona Maricopa County AZ AZ Culex quinquefasciatus Plante et al. https://www.ncbi.nlm.nih.gov/nuccore/KF704147 11008 SW03
KF704153 2010-08-06 North America USA Arizona Maricopa County AZ AZ Culex quinquefasciatus Plante et al. https://www.ncbi.nlm.nih.gov/nuccore/KF704153 11017 SW03
KJ145829 2010-XX-XX North America USA Corvus brachyrhynchos Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ145829 10455 SW03
KJ501117 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501117 10954 SW03
KJ501118 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501118 11005 SW03
KJ501120 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501120 10951 SW03
KJ501121 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501121 11031 SW03
KJ501122 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501122 11033 SW03
KJ501124 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501124 11007 SW03
KJ501170 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501170 10457 SW03
KJ501222 2012-XX-XX North America USA Culex Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501222 11029 SW03
KJ501434 2012-XX-XX North America USA Pelecanus erythrorhynchos Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501434 10979 WN02
KM012172 2012-XX-XX North America USA Texas TX Homo sapiens Grinev et al. https://www.ncbi.nlm.nih.gov/nuccore/KM012172 11029 SW03
KM012177 2012-XX-XX North America USA Wyoming WY Homo sapiens Grinev et al. https://www.ncbi.nlm.nih.gov/nuccore/KM012177 11029 WN02
KR348937 2010-08-06 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348937 10299 SW03
KR348938 2011-02-15 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348938 10263 SW03
KR348940 2010-08-06 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348940 10299 SW03
KR348941 2011-08-30 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348941 10299 SW03
KR348942 2011-08-30 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348942 10299 SW03
KR348944 2010-09-14 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348944 10299 SW03
KR348976 2011-07-18 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348976 10135 SW03
KR348977 2011-08-15 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348977 10216 SW03
KR348981 2011-01-09 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348981 10135 SW03
KR348993 2011-07-21 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348993 10260 SW03
KT020853 2014-10-14 North America USA Homo sapiens Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/KT020853 10299 WN02
KX547286 2015-09-03 North America USA New York Chautauqua NY Culiseta Shabman et al. 42.209869 -79.470428 https://www.ncbi.nlm.nih.gov/nuccore/KX547286 10785 WN02
KX547353 2000-07-11 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547353 10787 NY99
KX547361 2010-08-12 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547361 10787 SW03
KX547375 2011-09-08 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547375 10787 SW03
KX547395 2000-08-31 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547395 10787 NY99
KX547410 2012-07-30 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547410 10787 WN02
KX547456 2012-07-31 North America USA New York Chautauqua Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547456 10785 WN02
KX547460 2013-08-06 North America USA New York Madison Co. NY Aedes sp. Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547460 10787 WN02
KX547482 2013-08-07 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547482 10787 WN02
KX547519 2000-09-01 North America USA New York Westchester Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547519 10787 NY99
KX547548 2014-09-02 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547548 10786 WN02
KX547552 2010-09-16 North America USA New York Kings Co. NY Cyanocitta cristata Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547552 10787 SW03
KX547602 2000-09-01 North America USA New York Westchester Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547602 10787 NY99
KY216155 2012-07-31 North America USA Culex pipiens Ehrbar et al. https://www.ncbi.nlm.nih.gov/nuccore/KY216155 11007 WN02
MF175815 2012-10-09 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175815 10250 SW03
MF175827 2013-08-07 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175827 10250 WN02
MF175829 2013-08-06 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175829 10250 WN02
MF175831 2015-09-22 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175831 11032 WN02
MF175839 2014-08-28 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175839 11031 WN02
MF175858 2015-09-22 North America USA Texas Collin Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175858 11032 WN02
MF175863 2014-09-04 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175863 11032 WN02
MF175865 2015-09-16 North America USA Texas Montgomery Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175865 11035 WN02
MF175866 2014-09-09 North America USA Texas El Paso Co. Tx TX Culex tarsalis Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175866 11032 SW03
MF175873 2015-09-08 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175873 11030 WN02
MG004533 2014-06-03 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004533 10803 SW03
MG004537 2014-08-28 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004537 10803 SW03
MG004540 2015-05-12 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004540 10803 SW03
MH166901 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166901 11025 NY99
MH166903 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166903 11026 NY99
MH166904 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166904 11018 NY99
OQ721425 2004-05-25 North America USA California Los Angeles County CA CA Corvus brachyrhynchos Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/OQ721425 10302 WN02
OQ721436 2015-01-01 North America USA Washington Grant County WA WA Corvidae Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/OQ721436 10302 SW03
HM488126 1999-XX-XX North America USA Connecticut CT Corvus brachyrhynchos Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488126 10598 NY99
HM488127 1999-XX-XX North America USA Connecticut CT Corvus brachyrhynchos Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488127 10625 NY99
HM488130 2000-XX-XX North America USA Connecticut CT Culex salinarius Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488130 10621 NY99
HM488132 2000-XX-XX North America USA Connecticut CT Culiseta melanura Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488132 10621 NY99
HQ671707 1999-XX-XX North America USA Connecticut CT Culex pipiens Henn et al. https://www.ncbi.nlm.nih.gov/nuccore/HQ671707 10607 NY99
AF202541 XXXX-XX-XX North America USA New York NY Jia et al. https://www.ncbi.nlm.nih.gov/nuccore/AF202541 10945 NY99
AF206518 XXXX-XX-XX North America USA Connecticut Greenwich-Stanford Town Line CT Culex pipiens Anderson et al. https://www.ncbi.nlm.nih.gov/nuccore/AF206518 10975 NY99
AF481864 XXXX-XX-XX Ciconiidae Malkinson et al. https://www.ncbi.nlm.nih.gov/nuccore/AF481864 11029 pre-NY
accession date region country division location state host is_lab_host authors latitude longitude url length clade_membership
JF957161 2006-XX-XX North America USA Idaho ID Anez et al. https://www.ncbi.nlm.nih.gov/nuccore/JF957161 11016 SW03
JQ700438 2011-XX-XX North America USA Homo sapiens Anez et al. https://www.ncbi.nlm.nih.gov/nuccore/JQ700438 11016 SW03
JX015523 2010-08-31 North America USA Texas El Paso County TX TX Culex tarsalis Mann et al. https://www.ncbi.nlm.nih.gov/nuccore/JX015523 10997 SW03
KC333375 2012-08-04 North America USA Texas Harris Co. TX Passer domesticus Mann et al. https://www.ncbi.nlm.nih.gov/nuccore/KC333375 10932 SW03
KF704147 2010-08-01 North America USA Arizona Maricopa County AZ AZ Culex quinquefasciatus Plante et al. https://www.ncbi.nlm.nih.gov/nuccore/KF704147 11008 SW03
KF704153 2010-08-06 North America USA Arizona Maricopa County AZ AZ Culex quinquefasciatus Plante et al. https://www.ncbi.nlm.nih.gov/nuccore/KF704153 11017 SW03
KJ145829 2010-XX-XX North America USA Corvus brachyrhynchos Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ145829 10455 SW03
KJ501117 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501117 10954 SW03
KJ501118 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501118 11005 SW03
KJ501120 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501120 10951 SW03
KJ501121 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501121 11031 SW03
KJ501122 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501122 11033 SW03
KJ501124 2010-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501124 11007 SW03
KJ501170 2011-XX-XX North America USA Culex tarsalis Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501170 10457 SW03
KJ501222 2012-XX-XX North America USA Culex Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501222 11029 SW03
KJ501434 2012-XX-XX North America USA Pelecanus erythrorhynchos Newman et al. https://www.ncbi.nlm.nih.gov/nuccore/KJ501434 10979 WN02
KM012172 2012-XX-XX North America USA Texas TX Homo sapiens Grinev et al. https://www.ncbi.nlm.nih.gov/nuccore/KM012172 11029 SW03
KM012177 2012-XX-XX North America USA Wyoming WY Homo sapiens Grinev et al. https://www.ncbi.nlm.nih.gov/nuccore/KM012177 11029 WN02
KR348937 2010-08-06 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348937 10299 SW03
KR348938 2011-02-15 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348938 10263 SW03
KR348940 2010-08-06 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348940 10299 SW03
KR348941 2011-08-30 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348941 10299 SW03
KR348942 2011-08-30 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348942 10299 SW03
KR348944 2010-09-14 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348944 10299 SW03
KR348976 2011-07-18 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348976 10135 SW03
KR348977 2011-08-15 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348977 10216 SW03
KR348981 2011-01-09 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348981 10135 SW03
KR348993 2011-07-21 Culex tarsalis Duggal et al. https://www.ncbi.nlm.nih.gov/nuccore/KR348993 10260 SW03
KT020853 2014-10-14 North America USA Homo sapiens Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/KT020853 10299 WN02
KX547286 2015-09-03 North America USA New York Chautauqua NY Culiseta Shabman et al. 42.209869 -79.470428 https://www.ncbi.nlm.nih.gov/nuccore/KX547286 10785 WN02
KX547353 2000-07-11 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547353 10787 NY99
KX547361 2010-08-12 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547361 10787 SW03
KX547375 2011-09-08 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547375 10787 SW03
KX547395 2000-08-31 North America USA New York Suffolk Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547395 10787 NY99
KX547410 2012-07-30 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547410 10787 WN02
KX547456 2012-07-31 North America USA New York Chautauqua Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547456 10785 WN02
KX547460 2013-08-06 North America USA New York Madison Co. NY Aedes sp. Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547460 10787 WN02
KX547482 2013-08-07 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547482 10787 WN02
KX547519 2000-09-01 North America USA New York Westchester Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547519 10787 NY99
KX547548 2014-09-02 North America USA New York Oswego Co. NY Culiseta Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547548 10786 WN02
KX547552 2010-09-16 North America USA New York Kings Co. NY Cyanocitta cristata Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547552 10787 SW03
KX547602 2000-09-01 North America USA New York Westchester Co. NY Culex Shabman et al. https://www.ncbi.nlm.nih.gov/nuccore/KX547602 10787 NY99
KY216155 2012-07-31 North America USA Culex pipiens Ehrbar et al. https://www.ncbi.nlm.nih.gov/nuccore/KY216155 11007 WN02
MF175815 2012-10-09 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175815 10250 SW03
MF175827 2013-08-07 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175827 10250 WN02
MF175829 2013-08-06 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175829 10250 WN02
MF175831 2015-09-22 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175831 11032 WN02
MF175839 2014-08-28 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175839 11031 WN02
MF175858 2015-09-22 North America USA Texas Collin Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175858 11032 WN02
MF175863 2014-09-04 North America USA Texas Denton Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175863 11032 WN02
MF175865 2015-09-16 North America USA Texas Montgomery Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175865 11035 WN02
MF175866 2014-09-09 North America USA Texas El Paso Co. Tx TX Culex tarsalis Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175866 11032 SW03
MF175873 2015-09-08 North America USA Texas Dallas Co. Tx TX Culex quinquefasciatus Aroh et al. https://www.ncbi.nlm.nih.gov/nuccore/MF175873 11030 WN02
MG004533 2014-06-03 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004533 10803 SW03
MG004537 2014-08-28 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004537 10803 SW03
MG004540 2015-05-12 North America USA Arizona AZ Culex quinquefasciatus Hepp et al. https://www.ncbi.nlm.nih.gov/nuccore/MG004540 10803 SW03
MH166901 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166901 11025 NY99
MH166903 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166903 11026 NY99
MH166904 2000-XX-XX North America USA Virginia Norfolk VA VA Aves Swetnam et al. https://www.ncbi.nlm.nih.gov/nuccore/MH166904 11018 NY99
OQ721425 2004-05-25 North America USA California Los Angeles County CA CA Corvus brachyrhynchos Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/OQ721425 10302 WN02
OQ721436 2015-01-01 North America USA Washington Grant County WA WA Corvidae Grubaugh et al. https://www.ncbi.nlm.nih.gov/nuccore/OQ721436 10302 SW03
HM488126 1999-XX-XX North America USA Connecticut CT Corvus brachyrhynchos Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488126 10598 NY99
HM488127 1999-XX-XX North America USA Connecticut CT Corvus brachyrhynchos Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488127 10625 NY99
HM488130 2000-XX-XX North America USA Connecticut CT Culex salinarius Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488130 10621 NY99
HM488132 2000-XX-XX North America USA Connecticut CT Culiseta melanura Armstrong et al. https://www.ncbi.nlm.nih.gov/nuccore/HM488132 10621 NY99
HQ671707 1999-XX-XX North America USA Connecticut CT Culex pipiens Henn et al. https://www.ncbi.nlm.nih.gov/nuccore/HQ671707 10607 NY99
AF202541 XXXX-XX-XX North America USA New York NY Jia et al. https://www.ncbi.nlm.nih.gov/nuccore/AF202541 10945 NY99
AF206518 XXXX-XX-XX North America USA Connecticut Greenwich-Stanford Town Line CT Culex pipiens Anderson et al. https://www.ncbi.nlm.nih.gov/nuccore/AF206518 10975 NY99
AF481864 XXXX-XX-XX Ciconiidae Malkinson et al. https://www.ncbi.nlm.nih.gov/nuccore/AF481864 11029 pre-NY