We mostly store supplementary material here. For projects, please see the github pages of lab members and the lab web page.
Lab of microbial systems biology
We study the structure and dynamics of microbial communities with systems biology methods.
- 8 followers
- Belgium
- http://msysbiology.com/
Popular repositories Loading
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bacterial_growth
bacterial_growth Publica database and an interface for bacterial growth data
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BTRI_mucin_study_data
BTRI_mucin_study_data PublicProcessed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
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CellScanner
CellScanner PublicCellScanner counts microbial species in flow cytometry data of communities separately with the help of a classifier that is trained on mono-cultures.
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GutMicrobes2022
GutMicrobes2022 PublicSupplementary Material for van de Velde et al. Gut Microbes 2022
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Repositories
Showing 9 of 9 repositories
- CellScanner Public
CellScanner counts microbial species in flow cytometry data of communities separately with the help of a classifier that is trained on mono-cultures.
- PlasticDaphnia-ISMEJ Public
Effects of microplastics on Daphnia-associated microbiomes in situ and in vitro
- PlasticEnzSearch Public
- BTRI_mucin_study_data Public
Processed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
- BTRI_mucin_study_scripts Public
Scripts for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
